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Exploring Features Contributing to the Early Prediction of Sepsis Using Machine Learning

2021· article· en· W4200207201 on OpenAlexaff

Bibliographic record

Venue2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) · 2021
Typearticle
Languageen
FieldMedicine
TopicSepsis Diagnosis and Treatment
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsHealth recordsSepsisPredictive modellingMissing dataHealth careSupervised learningMedical record

Abstract

fetched live from OpenAlex

The increasing availability of electronic health records and administrative data and the adoption of computer-based technologies in healthcare have significantly focused on medical informatics. Sepsis is a time-critical condition with high mortality, yet it is often not identified in a timely fashion. The early detection and diagnosis of sepsis can increase the likelihood of survival and improve long-term outcomes for patients. In this paper, we use SHapley Additive exPlanations (SHAP) analysis to explore the variables most highly associated with developing sepsis in patients and evaluating different supervised learning models for classification. To develop our predictive models, we used the data collected after the first and the fifth hour of admission and evaluated the contribution of different features to the prediction results for both time intervals. The results of our study show that, while there is a high level of missing data during the early stages of admission, this data can be effectively utilized for the early prediction of sepsis. We also found a high level of inconsistency between the contributing features at different stages of admission, which should be considered when developing machine learning models.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.014
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.020

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.014
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.188
GPT teacher head0.352
Teacher spread0.164 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2021
Admission routes1
Has abstractyes

Explore more

Same venue2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)→Same topicSepsis Diagnosis and Treatment→French-language works237,207→