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Record W4200341928 · doi:10.1111/jse.12819

Phylogeny and biogeography of <i>Calamagrostis</i> (Poaceae: Pooideae: Poeae: Agrostidinae), description of a new genus, <i>Condilorachia</i> (Calothecinae), and expansion of <i>Greeneochloa</i> and <i>Pentapogon</i> (Echinopogoninae)

2021· article· en· W4200341928 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of Systematics and Evolution · 2021
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Taxonomy and Phylogenetics
Canadian institutionsCanadian Museum of Nature
FundersU.S. Department of AgricultureNational Geographic SocietySmithsonian Institution
KeywordsBiologyGenusBotanyIntrogressionPhylogeneticsCladeInternal transcribed spacerZoologyPhylogenetic tree

Abstract

fetched live from OpenAlex

Abstract To investigate the evolutionary relationships and biogeographical history among the species of Calamagrostis and other members of subtribes Agrostidinae, Calothecinae, Echinopogoninae, and Paramochloinae, we generated a phylogeny based on DNA sequences from one nuclear ribosomal (ITS) and three plastid regions ( rpl32‐trnL spacer, rps16‐trnK spacer, and rps16 intron). Based on our phylogeny, we identified seven species groups (clades) within Calamagrostis : the Meridionalis group comprises two species from Central and South America, the Americana group comprises species from North America, the Deyeuxia and Epigeios groups comprise species from Eurasia, the Orientalis group comprises species from East Asia, the Purpurea group comprises species from Eurasia and North America, and the Calamagrostis group comprises species from Eurasia and North America. We hypothesize that Calamagrostis originated in North America with the primary split of the Meridionalis group, followed by split between the autochthonous Americana group and two future Eurasian branches encompassing all the remaining groups, which possibly dispersed into Eurasia independently. The molecular data suggest that hybridization and genomic introgression played a prominent role in the evolutionary history of Calamagrostis . We propose a new genus, Condilorachia, segregated from Trisetum s.l., with three species from South America for which we propose new combinations: Condilorachia bulbosa , Condilorachia brasiliensis , and Condilorachia juergensii ; a new combination in Greeneochloa , Greeneochloa expansa ; and the subsumption of Dichelachne into Pentapogon with 20 new combinations: Pentapogon avenoides , Pentapogon brassii , Pentapogon chaseianus , Pentapogon crinita , Pentapogon densus , Pentapogon frigidus , Pentapogon gunnianus , Pentapogon hirtella , Pentapogon inaequiglumis , Pentapogon lautumia , Pentapogon micrantha , Pentapogon parva , Pentapogon quadrisetus , Pentapogon rara , Pentapogon robusta , Pentapogon scaberulus , Pentapogon sclerophyllus , Pentapogon suizanensis , Pentapogon sieberiana , and Pentapogon validus . We provide a diagnosis, description, and a key to the species of Condilorachia .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.695
Threshold uncertainty score0.437

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.192
Teacher spread0.176 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it