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Record W4200358734 · doi:10.1111/resp.14149_70

O12‐3: Epithelial mesenchymal transition (EMT) is an active process in smokers, patients with small airway disease and COPD: Implications for small airway fibrosis and obliteration

2021· article· en· W4200358734 on OpenAlexaff
Akihiro Shiroshita, Chisato Miyakoshi, Shunta Tsutsumi, Hiroshi Shiba, Chigusa Shirakawa, Kenya Sato, Shinya Matsushita, Yuya Kimura, Keisuke Tomii, Masahiro Ohgiya, Yuki Kataoka, Wenying Lu, James Markos, Collin Chia, Josie Larby, Greg Haug, Ashutosh Hardikar, Gurpreet K. Singhera, Tillie‐Louise Hackett, Mathew Suji Eapen, Sukhwinder Singh Sohal

Bibliographic record

VenueRespirology · 2021
Typearticle
Languageen
FieldMedicine
TopicChronic Obstructive Pulmonary Disease (COPD) Research
Canadian institutionsSt. Paul's HospitalUniversity of British Columbia
Fundersnot available
KeywordsMedicineAirwayCOPDEpithelial–mesenchymal transitionPathologyInternal medicineSurgeryCancer

Abstract

fetched live from OpenAlex

Background and Aims: We previously investigated that EMT is active in patients with chronic airflow limitation. We now further illustrate EMT changes in a wider demographic patient group consisting of COPD current and ex-smokers (COPD-CS, COPD-ES), small airway disease (SAD) and normal lung function smokers (NLFS) compared to normal controls (NC). Methods: Surgically resected small airway (SA) tissue from all pathological groups and NC was immunostained for mesenchymal proteins S100A4, Vimentin and N-cadherin, and epithelial marker E-cadherin. These proteins were quantified in the SA epithelium as per mm of reticular basement membrane (Rbm) or percentage staining. All tissue analysis was done blindly with Image-ProPlus 7.0. Results: E-cadherin markedly decreased across all pathological groups with minimal intergroup variability compared to NC (p<0.01). SA epithelium was significantly positive for both Vimentin and S100A4 in NLFS (p<0.01), SAD (p<0.001) and COPD groups (p<0.001) than NC, albeit COPD-ES tended back to normal levels. Likewise, epithelial N-cadherin level was upregulated in all pathological groups, particularly in SAD (p<0.05) and COPD-CS (p<0.005) compared to NC. Rbm Vimentin +ive cells showed a similar trend to epithelium across all pathological groups (p<0.01), however, such changes were only observed for NLFS and COPD-ES regarding S100A4 (p<0.04). Vimentin and S100A4 epithelium and Rbm expression negatively correlated with E-cadherin expression (p<0.01). Conclusions: EMT is an active process in the SA of smokers and COPD patients potentially contributing to SA fibrosis and obliteration seen in these patients. This is the first study to show such changes in well phenotyped individuals.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.291
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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