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Record W4200360831 · doi:10.3390/ecmc2021-11560

Investigating the interactions of bisphosphonates with amyloid beta (Aβ) proteins

2021· article· en· W4200360831 on OpenAlexaff
Rahul Chowdary Karuturi, Praveen P. N. Rao

Bibliographic record

VenueProceedings of 7th International Electronic Conference on Medicinal Chemistry · 2021
Typearticle
Languageen
FieldMedicine
TopicBone health and treatments
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsBETA (programming language)Amyloid (mycology)Amyloid betaComputer scienceChemistryMedicineBiochemistryPathologyPeptideProgramming language

Abstract

fetched live from OpenAlex

The unmet therapeutic need for a devastating neurodegenerative disorder, Alzheimer’s disease (AD), which is marked by the deposition of beta-amyloid (Aβ) plaques in the brain - mandates the development of novel anti-Aβ therapies. We investigated the drug-repurposing potential of the bisphosphonate (BPs) class of drugs as anti-Aβ agents. It is known that women are more prone to get AD and are also observed to suffer from osteoporosis after menopause. Therefore, we determined the interactions of BPs with Aβ proteins. The anti-Aβ-aggregation activity against the Aβ40 peptide was evaluated by conducting fluorescence aggregation kinetic studies, transmission electron microscopy (TEM), and computational modeling. Preliminary results suggested that BPs exhibit anti-Aβ activity. Risedronate and alendronate were identified as promising inhibitors of Aβ aggregation. Molecular docking studies for the dimer model of Aβ40 peptide indicated that both risedronate and alendronate showed interactions in the aggregation-prone region of the dimer peptide model. These studies demonstrate that BPs exhibit anti-Aβ activity in vitro and can be used to discover and develop novel anti-AD agents.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.293
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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Same venueProceedings of 7th International Electronic Conference on Medicinal ChemistrySame topicBone health and treatmentsFrench-language works237,207