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Record W4200623076 · doi:10.3389/fmars.2021.724913

A Global Ocean Oxygen Database and Atlas for Assessing and Predicting Deoxygenation and Ocean Health in the Open and Coastal Ocean

2021· article· en· W4200623076 on OpenAlexaff
Marilaure Grégoire, Véronique Garçon, Hernan E. Garcia, Denise L. Breitburg, Kirsten Isensee, Andreas Oschlies, Maciej Telszewski, Alexander Barth, Henry C. Bittig, Jacob Carstensen, Thierry Carval, Fei Chai, Francisco P. Chávez, Daniel J. Conley, Laurent Coppola, Sean A. Crowe, Kim Currie, Minhan Dai, Bruno Deflandre, Boris Dewitte, Robert J. Díaz, Emilio García‐Robledo, Denis Gilbert, Alessandra Giorgetti, Ronnie N. Glud, Dimitri Gutiérrez, Shigeki Hosoda, Masao Ishii, Gil S. Jacinto, Chris Langdon, Siv K. Lauvset, Lisa A. Levin, Karin E. Limburg, Hela Mehrtens, Ivonne Montès, Wajih Naqvi, Aurélien Paulmier, Benjamin Pfeil, Grant C. Pitcher, Sylvie Pouliquen, Nancy N. Rabalais, Christophe Rabouille, Virginie Recape, Michael R. Roman, Kenneth A. Rose, Daniel L. Rudnick, Jodie L. Rummer, Catherine Schmechtig, Sunke Schmidtko, Brad A. Seibel, Caroline P. Slomp, U. Rashid Sumalia, Toste Tanhua, Virginie Thierry, Hiroshi Uchida, Rik Wanninkhof, Moriaki Yasuhara

Bibliographic record

VenueFrontiers in Marine Science · 2021
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicOcean Acidification Effects and Responses
Canadian institutionsFisheries and Oceans CanadaOkanagan University CollegeUniversity of British Columbia, Okanagan CampusUniversity of British Columbia
FundersNational Oceanic and Atmospheric AdministrationMinistero dell’Istruzione, dell’Università e della RicercaBelgian Federal Science Policy OfficeFundação para a Ciência e a TecnologiaFonds De La Recherche Scientifique - FNRSEuropean CommissionAgencia Nacional de Investigación y DesarrolloNorges ForskningsrådAgence Nationale de la RechercheNational Science Foundation
KeywordsDeoxygenationOceanographyPelagic zoneEnvironmental scienceAtlas (anatomy)Ocean observationsGeologyBiology

Abstract

fetched live from OpenAlex

In this paper, we outline the need for a coordinated international effort toward the building of an open-access Global Ocean Oxygen Database and ATlas (GO 2 DAT) complying with the FAIR principles (Findable, Accessible, Interoperable, and Reusable). GO 2 DAT will combine data from the coastal and open ocean, as measured by the chemical Winkler titration method or by sensors (e.g., optodes, electrodes) from Eulerian and Lagrangian platforms (e.g., ships, moorings, profiling floats, gliders, ships of opportunities, marine mammals, cabled observatories). GO 2 DAT will further adopt a community-agreed, fully documented metadata format and a consistent quality control (QC) procedure and quality flagging (QF) system. GO 2 DAT will serve to support the development of advanced data analysis and biogeochemical models for improving our mapping, understanding and forecasting capabilities for ocean O 2 changes and deoxygenation trends. It will offer the opportunity to develop quality-controlled data synthesis products with unprecedented spatial (vertical and horizontal) and temporal (sub-seasonal to multi-decadal) resolution. These products will support model assessment, improvement and evaluation as well as the development of climate and ocean health indicators. They will further support the decision-making processes associated with the emerging blue economy, the conservation of marine resources and their associated ecosystem services and the development of management tools required by a diverse community of users (e.g., environmental agencies, aquaculture, and fishing sectors). A better knowledge base of the spatial and temporal variations of marine O 2 will improve our understanding of the ocean O 2 budget, and allow better quantification of the Earth’s carbon and heat budgets. With the ever-increasing need to protect and sustainably manage ocean services, GO 2 DAT will allow scientists to fully harness the increasing volumes of O 2 data already delivered by the expanding global ocean observing system and enable smooth incorporation of much higher quantities of data from autonomous platforms in the open ocean and coastal areas into comprehensive data products in the years to come. This paper aims at engaging the community (e.g., scientists, data managers, policy makers, service users) toward the development of GO 2 DAT within the framework of the UN Global Ocean Oxygen Decade (GOOD) program recently endorsed by IOC-UNESCO. A roadmap toward GO 2 DAT is proposed highlighting the efforts needed (e.g., in terms of human resources).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.024
Threshold uncertainty score0.049

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0060.006
Science and technology studies0.0000.000
Scholarly communication0.0010.002
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.280
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations131
Published2021
Admission routes1
Has abstractyes

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