MétaCan
Menu
Back to cohort
Record W4205968140 · doi:10.5376/lgg.2022.13.0001

Construction and Analysis of a Yeast cDNA Library from <i>Medicago truncatula</i>

2022· article· en· W4205968140 on OpenAlexvenueno aff
Shuwen Li, Di Dong, Yinruizhi Li, Mengdi Wang, Liebao Han, Tiejun Zhang

Bibliographic record

VenueLegume Genomics and Genetics · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicFungal and yeast genetics research
Canadian institutionsnot available
Fundersnot available
KeywordsMedicago truncatulaMedicagocDNA libraryYeastComplementary DNABiologyChemistryGeneGenetics

Abstract

fetched live from OpenAlex

Yeast two-hybrid and one-hybrid technologies are an efficient molecular biology technique for screening protein interactions or protein and DNA interactions, and are an important means for the interaction and regulation of biological macromolecules. In order to obtain a high-capacity Medicago truncatula gene library, it provides a basis for further digging the related genes of Medicago truncatula and improving the quality of Medicago truncatula . In this study, Medicago truncatula from different tissue sources was selected, and different hormone induction or stress treatments were performed on Medicago truncatula , using SMART technology to successfully construct a high-capacity Medicago truncatula yeast hybrid cDNA library. The library quality test results showed that the library titration number was 5×10 7 CFU/mL, the library capacity was 1.28×10 7 CFU, and the average insert fragment length was greater than 1 000 bp. All 24 clones were able to amplify bands, and the cDNA fragment recombination rate was 100%. The library has high quality and complete genetic information, which meets the requirements of yeast hybrid screening test, and can be applied to the research of gene expression regulation of Medicago truncatula and the screening test of interaction protein.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.211
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

Explore more

Same venueLegume Genomics and GeneticsSame topicFungal and yeast genetics researchFrench-language works237,207