MétaCan
Menu
Back to cohort
Record W4206237675 · doi:10.1021/acs.analchem.1c04263

Conditional Generative Adversarial Network for Spectral Recovery to Accelerate Single-Cell Raman Spectroscopic Analysis

2022· article· en· W4206237675 on OpenAlexafffund
Xiangyun Ma, Kaidi Wang, Keng C. Chou, Qifeng Li, Xiaonan Lu

Bibliographic record

VenueAnalytical Chemistry · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSpectroscopy Techniques in Biomedical and Chemical Research
Canadian institutionsMcGill UniversityUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of CanadaNational Natural Science Foundation of ChinaCanada Foundation for Innovation
KeywordsRaman spectroscopyChemistryBiological systemSIGNAL (programming language)Signal-to-noise ratio (imaging)Generative adversarial networkSpectral lineAnalytical Chemistry (journal)Noise (video)Artificial intelligencePattern recognition (psychology)Computer scienceDeep learningOpticsTelecommunicationsChromatographyPhysics

Abstract

fetched live from OpenAlex

Raman spectroscopy is a powerful tool to investigate cellular heterogeneity. However, Raman spectra for single-cell analysis are hindered by a low signal-to-noise ratio (SNR). Here, we demonstrate a simple and reliable spectral recovery conditional generative adversarial network (SRGAN). SRGAN reduced the data acquisition time by 1 order of magnitude (i.e., 30 vs 3 s) by improving the SNR by a factor of ∼6. We classified five major foodborne bacteria based on single-cell Raman spectra to further evaluate the performance of SRGAN. Spectra processed using SRGAN achieved an identification accuracy of 94.9%, compared to 60.5% using unprocessed Raman spectra. SRGAN can accelerate spectral collection to improve the throughput of Raman spectroscopy and enable real-time monitoring of single living cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.173
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.306
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations35
Published2022
Admission routes2
Has abstractyes

Explore more

Same venueAnalytical ChemistrySame topicSpectroscopy Techniques in Biomedical and Chemical ResearchFrench-language works237,207