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Record W4206453600 · doi:10.1101/2022.01.17.476627

Impact of ionizing radiation on the environmental microbiomes of Chernobyl wetlands

2022· preprint· en· W4206453600 on OpenAlexaff
Elin Videvall, Pablo Burraco, Germán Orizaola

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2022
Typepreprint
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsASTER
FundersVetenskapsrådetHelge Ax:son Johnsons StiftelseMinisterio de Ciencia, Innovación y Universidades
KeywordsIonizing radiationWetlandMicrobiomeEnvironmental scienceRadioactive contaminationRadionuclideEcologyBiologyContaminationPhysicsBioinformatics

Abstract

fetched live from OpenAlex

Abstract Radioactive contamination in the form of ionizing radiation can be a devastating pollutant because it has the potential to cause damage to DNA and other biomolecules. Anthropogenic sources of ionizing radiation include accidents in nuclear power plants, such as the one in Chernobyl 1986, which caused long-term radioactive pollution. Studies on animals within radioactive zones have provided us with a greater understanding of how wildlife can persevere despite chronic radiation exposure, however, we still know very little about the effects of radiation on the microbial communities in the environment. Here, we examined the impact of ionizing radiation and other environmental factors on the diversity and composition of environmental microbiomes in the wetlands of Chernobyl. We combined extensive field sampling along a gradient of radiation together with 16S rRNA high-throughput metabarcoding (Illumina NovaSeq). While radiation did not affect the alpha diversity of the microbiomes in sediment, soil, or water, it had a strong effect on the beta diversity, indicating that the microbial composition was affected by ionizing radiation. Specifically, we detected several microbial taxa that were more abundant in areas with high radiation levels within the Chernobyl Exclusion Zone, including bacteria and archaea known to be radioresistant. Overall, our results reveal the existence of rich and diverse microbiomes in Chernobyl wetlands, with multiple taxonomic groups that are able to thrive despite the radioactive contamination. Further field and laboratory-based approaches will help to forecast the functionality and re-naturalization dynamics of radiocontaminated environments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.216
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2022
Admission routes1
Has abstractyes

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