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Record W4211190666 · doi:10.1002/0470028637.met207

Xanthine Oxidoreductase

2004· other· en· W4211190666 on OpenAlexaff
Takeshi Nishino, E.F. Pai

Bibliographic record

VenueHandbook of Metalloproteins · 2004
Typeother
Languageen
FieldMedicine
TopicGout, Hyperuricemia, Uric Acid
Canadian institutionsPrincess Margaret Cancer CentreUniversity of TorontoOntario Institute for Cancer Research
Fundersnot available
KeywordsXanthine dehydrogenaseHypoxanthineChemistryOxidoreductaseXanthine oxidasePterinBiochemistryXanthineDehydrogenaseNAD+ kinaseElectron acceptorStereochemistryCofactorEnzyme

Abstract

fetched live from OpenAlex

Abstract A single gene product has been identified as responsible for the two catalytic activities, xanthine dehydrogenase, XDH (EC 1.1.1.204), and xanthine oxidase, XO (EC 1.2.3.2). Synthesized as XDH (ultimate electron acceptor NAD + ), the protein can be converted to XO (ultimate electron acceptor oxygen) either reversibly by oxidation of cysteine residues or irreversibly by proteolysis. Xanthine oxidoreductase (XOR) is a ubiquitous enzyme; its physiological role is the oxidation of hypoxanthine to xanthine and further to uric acid, although in vitro the enzyme's specificity is rather broad, accepting a large number of purines, pteridines, and aldehydes as substrates. XOR, in contrast to most other hydroxylases, incorporates water‐derived oxygen into its substrate. The electrons are transferred from xanthine to a Mopterin center and from there via two Fe 2 –S 2 clusters and FAD to NAD + or oxygen, respectively. The enzyme is the target of the antigout drug allopurinol; it is involved in hyperuricemia and xanthinuria and postulated to participate in postischemic reperfusion injury. Crystal structures have been determined for native and mutant XDHs and XOs from man, cow, rat, and Rhodobacter capsulatus . The conformational changes linked to the dehydrogenase/oxidase transition have been identified and interpreted. A structure‐based explanation for the catalytic mechanism is emerging.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.221
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0130.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.249
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2004
Admission routes1
Has abstractyes

Explore more

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