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<i><scp>U</scp>reaplasma</i>

2018· other· en· W4211239340 on OpenAlexaff
Janet A. Robertson, D Taylor‐Robinson, Meghan May, Daniel R. Brown

Bibliographic record

VenueBergey's Manual of Systematics of Archaea and Bacteria · 2018
Typeother
Languageen
FieldImmunology and Microbiology
TopicMicrobial infections and disease research
Canadian institutionsUniversity of Alberta
FundersUniversity of BirminghamUniversity of Alabama
KeywordsUreaplasmaBiologyMollicutesMicrobiologyGenomeSerotypeGeneticsMycoplasmataceaeUreaplasma urealyticumGenusMycoplasmaZoologyGene

Abstract

fetched live from OpenAlex

U.re.a.plas'ma. N.L. fem. n.ureaurea; Gr. neut. n.plasmaanything formed or moulded, image, figure; N.L. neut. n.Ureaplasmaurea form. Tenericutes / Mollicutes / Mycoplasmatales / Mycoplasmataceae / Ureaplasma Bacteria in the genusUreaplasmaare small (350–500 nm in diameter) coccoid cells, devoid of a cell wall, that form exceptionally tiny (<0.2 mm) colonies on solid media. Like the closely‐related genusMycoplasma, ureaplasmas have small (0.75–1.2 Mb) A+T‐rich genomes, use the codon UGA to encode tryptophan, and are nutritionally fastidious, but unlike mycoplasmas they hydrolyze urea rather than glucose or arginine for ATP synthesis. DNA–DNA hybridizations and serotyping involving a family of phase‐variable surface lipoproteins called multiple‐banded antigens have been important in developing the species concept for this genus. In nature all species are obligate commensals or opportunistic pathogens of vertebrate hosts. Based on the most recent comparative genome analyses, a consensus is emerging that the strains associated with humans, currently recognized as biovars of eitherUreaplasma urealyticumorUreaplasma parvum, probably exist collectively as quasi‐species rather than as stable serovars in their native environment. DNA G + C content (mol%): 25–32 (Bd,Tm, complete genome sequences). Type species:Ureaplasma urealyticumShepard, Lunceford, Ford, Purcell, Taylor‐Robinson, Razin and Black 1974, 167ALemend. Robertson, Stemke, Davis, Harasawa, Thirkell, Kong, Shepard and Ford 2002, 593.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.798
Threshold uncertainty score0.288

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.002
Science and technology studies0.0010.000
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.7980.743

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.258
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2018
Admission routes1
Has abstractyes

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