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Preliminary Results in the Development of A Generic Transplant Function Rating System

2017· preprint· en· W4212801666 on OpenAlexaboutno aff
Farid Faroutan

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldMedicine
TopicOrgan Transplantation Techniques and Outcomes
Canadian institutionsnot available
Fundersnot available
KeywordsFunction (biology)Rating systemEconomicsBiology

Abstract

fetched live from OpenAlex

IntroductionA unique challenge to clinical trials in deceased donor care is the integration of outcomes from the recipients of potentially many organs (kidneys, liver, lungs, heart, pancreas, intestine) from a single donor. MethodsIn consultation with experts in research methodology, biostatistics, and multi-organ transplantation, we sought to develop a generic rating system of transplant function that is easy to apply (less than 1 minute by a transplant physician) using routine clinical data, at a specific, early post-operative point in time. We aimed for a surrogate measure of long-term graft function, survival, and quality of life. Working iteratively with clinical experts, and taking into consideration the early and late post-operative courses across organ types, we sought to unify key concepts of normal, impaired, severely impaired, and irreversible loss of graft function. Simple, organ-specific guides to apply this instrument are informed by organ-specific systematic reviews to identify all independent predictors of graft loss post-transplantation.ResultsFigure 1 shows the current generic instrument. Clinical experts rate organ function at a single point in time: i) at hospital discharge, ii) death, or iii) 28 days, when hospitalization is prolonged. When function is impaired, they consider the expected trajectory. Conceptually, severe impairment in graft function refers to a 25% probability of irreversible graft loss after one year. For recipients who die in hospital, cause of death is judged as: due to graft dysfunction, related to graft dysfunction, or unrelated to graft dysfunction. Organ-specific systematic reviews are at various stages of completion, with a registered protocol (PROSPERO).ConclusionWe have developed a generic system for rating graft function following transplantation that has face validity among collaborating transplant experts and research methodologists. Research application will depend upon future validation studies including retrospective and prospective clinical application in Canadian and international transplant centers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.109
metaresearch head score (Gemma)0.149
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.109
Threshold uncertainty score0.575

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1090.149
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.003
Bibliometrics0.0020.002
Science and technology studies0.0010.001
Scholarly communication0.0030.002
Open science0.0020.003
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0130.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.048
GPT teacher head0.297
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2017
Admission routes1
Has abstractyes

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