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Record W4214552137 · doi:10.3410/f.11710956.13774054

Faculty Opinions recommendation of Germinal center B cell and T follicular helper cell development initiates in the interfollicular zone.

2011· dataset· en· W4214552137 on OpenAlexfundaboutno aff
Dan Conrad

Bibliographic record

VenueFaculty Opinions – Post-Publication Peer Review of the Biomedical Literature · 2011
Typedataset
Languageen
FieldMedicine
TopicCervical Cancer and HPV Research
Canadian institutionsnot available
FundersNational Institutes of HealthCanadian Institutes of Health ResearchMultiple Sclerosis SocietyMultiple Sclerosis Society of CanadaYale University
KeywordsGerminal centerBCL6B cellFollicular phaseChemistryCD40Cell biologyMolecular biologyImmunologyBiologyAntibodyEndocrinologyCytotoxic T cellIn vitroBiochemistry

Abstract

fetched live from OpenAlex

We identify the interfollicular (IF) zone as the site where germinal center B cell and T follicular helper (Tfh) cell differentiation initiates. For the first 2 days postimmunization, antigen-specific T and B cells remained confined within the IF zone, formed long-lived interactions, and upregulated the transcriptional repressor Bcl6. T cells also acquired the Tfh cell markers CXCR5, PD-1, and GL7. Responding B and T cells migrated to the follicle interior directly from the IF zone, T cell immigration preceding B cells by 1 day. Notably, in the absence of cognate B cells, Tfh cells still formed and migrated to the follicle. However, without such B cells, PD-1, ICOS, and GL7 were no longer expressed on follicular Bcl6(hi) T cells that nevertheless persisted in the follicle. Thus, Ag-specific B cells are required for the maintenance of the PD-1(hi)ICOS(hi)GL7(hi) Tfh cell phenotype within the follicle, but not for their initial differentiation in the IF zone.Copyright © 2011 Elsevier Inc. All rights reserved. PMID: 21636295 Funding information This work was supported by: CIHR, Canada NIAID NIH HHS, United States Grant ID: R01 AI080850 NIAMS NIH HHS, United States Grant ID: P30AR053495 NIAID NIH HHS, United States Grant ID: R01AI080850 NIAMS NIH HHS, United States Grant ID: P30 AR053495 NIAID NIH HHS, United States Grant ID: R01 AI080850-01A1 More Less keyboard_arrow_down

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: none
Teacher disagreement score0.579
Threshold uncertainty score0.600

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0020.001
Scholarly communication0.0050.002
Open science0.0010.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.5790.401

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.365
Teacher spread0.314 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes2
Has abstractyes

Explore more

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