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Record W4214633508 · doi:10.1139/cjb-2021-0195

Conservation assessment of a range-edge population of <i>Trichophorum planifolium</i> (Cyperaceae) reveals range-wide inbreeding and locally divergent environmental conditions

2022· article· en· W4214633508 on OpenAlexafffundvenueabout
Victoria J. Nowell, Song Wang, Tyler Smith

Bibliographic record

VenueBotany · 2022
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBotany, Ecology, and Taxonomy Studies
Canadian institutionsCarleton UniversityAgriculture and Agri-Food Canada
FundersAgriculture and Agri-Food CanadaEnvironment and Climate Change CanadaMinistry of Natural Resources
KeywordsBiologyEndangered speciesPopulationEcologyRange (aeronautics)Genetic diversityInbreedingInbreeding depressionConservation geneticsEffective population sizePopulation fragmentationSmall population sizeCyperaceaeHabitatDemographyPoaceaeGeneticsMicrosatellite

Abstract

fetched live from OpenAlex

Peripheral populations hold special conservation significance as repositories of genetic diversity, while they may also be at increased risk of extirpation. We collected genetic, ecological, and distributional data to evaluate an endangered range-edge population of Trichophorum planifolium (Sprengel) Palla. Our data show that, range-wide, T. planifolium has remarkably low within-population diversity, and most populations are dominated by a small number of unique genotypes. However, the extremely low observed and expected heterozygosity we document is comparable to results from other woodland sedges. The life history of this species results in high levels of inbreeding. The low diversity of the single remaining Canadian population is therefore not unusual for this species and does not support suggestions that this population suffers from elevated inbreeding depression. However, it is geographically isolated, and its soil environment is unusual for the species. These conditions may have facilitated local adaptation of conservation value for the long-term persistence of this species. In addition, we identified populations within the core range of this species that are comparably isolated to the peripheral population or that demonstrate greater genetic divergence. Consequently, while distinctions between core and peripheral populations are important for conservation management, understanding variation across the range of a species is key to effective protection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.064
Threshold uncertainty score0.353

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.229
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2022
Admission routes4
Has abstractyes

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