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Record W4220654614 · doi:10.1117/12.2613039

Stroke lesion localization in 3D MRI datasets with deep reinforcement learning

2022· article· en· W4220654614 on OpenAlexaff
Samuel Robertson, Anup Tuladhar, Deepthi Rajashekar, Nils D. Forkert

Bibliographic record

VenueMedical Imaging 2022: Computer-Aided Diagnosis · 2022
Typearticle
Languageen
FieldComputer Science
TopicAdvanced Neural Network Applications
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsComputer scienceArtificial intelligenceReinforcement learningFluid-attenuated inversion recoveryDeep learningTest setStroke (engine)Context (archaeology)Machine learningPattern recognition (psychology)Magnetic resonance imagingRadiologyMedicine

Abstract

fetched live from OpenAlex

The efficacy of stroke treatments is highly time-sensitive, and any computer-aided diagnosis support method that can accelerate diagnosis and treatment initiation may improve patient outcomes. Within this context, lesion identification in MRI datasets can be time consuming and challenging, even for trained clinicians. Automatic lesion localization can expedite diagnosis by flagging datasets and corresponding regions of interest for further assessment. In this work, we propose a deep reinforcement learning agent to localize acute ischemic stroke lesions in MRI images. Therefore, we adapt novel techniques from the computer vision domain to medical image analysis, allowing the agent to sequentially localize multiple lesions in a single dataset. The proposed method was developed and evaluated using a database consisting of fluid attenuated inversion recovery (FLAIR) MRI datasets from 466 ischemic stroke patients acquired at multiple centers. 372 patients were used for training while 94 patients (20% of available data) were employed for testing. Furthermore, the model was tested using 58 datasets from an out-of-distribution test set to investigate the generalization error in more detail. The model achieved a Dice score of 0.45 on the hold-out test set and 0.43 on images from the out-of-distribution test set. In conclusion, we apply deep reinforcement learning to the clinically well-motivated task of localizing multiple ischemic stroke lesions in MRI images, and achieve promising results validated on a large and heterogeneous collection of datasets.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.014
Threshold uncertainty score0.028

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.006
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.263
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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