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Record W4220747142 · doi:10.1016/j.cmet.2021.12.021

Heterogenous impairment of α cell function in type 2 diabetes is linked to cell maturation state

2022· article· en· W4220747142 on OpenAlexafffund
Xiao-Qing Dai, Joan Camuñas-Soler, Linford J.B. Briant, Theodore dos Santos, Aliya F Spigelman, Emily M. Walker, Rafael Arrojo e Drigo, Austin Bautista, Robert C. Jones, Dana Avrahami, James Lyon, Aifang Nie, Nancy Smith, Yongneng Zhang, Janyne Johnson, Jocelyn E. Manning Fox, Evangelos D. Michelakis, Peter E. Light, Klaus H. Kaestner, Seung K. Kim, Patrik Rorsman, Roland Stein, Stephen R. Quake, Patrick E. MacDonald

Bibliographic record

VenueCell Metabolism · 2022
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsUniversity of Alberta
FundersBreakthrough T1D CanadaMedical Research CouncilCanadian Institutes of Health ResearchNational Institute of Diabetes and Digestive and Kidney DiseasesAlberta InnovatesNational Institutes of HealthSyddansk UniversitetCanada Research ChairsUniversity of Alberta
KeywordsExocytosisCell biologyBiologyType 2 diabetesDownregulation and upregulationCellCell typeTranscriptomeElectrophysiologyProgenitor cellPhenotypeInternal medicineEndocrinologyStem cellSecretionDiabetes mellitusNeuroscienceMedicineBiochemistryGene

Abstract

fetched live from OpenAlex

In diabetes, glucagon secretion from pancreatic α cells is dysregulated. The underlying mechanisms, and whether dysfunction occurs uniformly among cells, remain unclear. We examined α cells from human donors and mice using electrophysiological, transcriptomic, and computational approaches. Rising glucose suppresses α cell exocytosis by reducing P/Q-type Ca 2+ channel activity, and this is disrupted in type 2 diabetes (T2D). Upon high-fat feeding of mice, α cells shift toward a "β cell-like" electrophysiological profile in concert with indications of impaired identity. In human α cells we identified links between cell membrane properties and cell surface signaling receptors, mitochondrial respiratory chain complex assembly, and cell maturation. Cell-type classification using machine learning of electrophysiology data demonstrated a heterogenous loss of "electrophysiologic identity" in α cells from donors with type 2 diabetes. Indeed, a subset of α cells with impaired exocytosis is defined by an enrichment in progenitor and lineage markers and upregulation of an immature transcriptomic phenotype, suggesting important links between α cell maturation state and dysfunction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.220
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations83
Published2022
Admission routes2
Has abstractno

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