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Record W4221064967 · doi:10.1111/imcb.12543

OCA‐B does not act as a transcriptional coactivator in T cells

2022· article· en· W4221064967 on OpenAlexafffund
Félix Lombard‐Vadnais, Julie Lacombe, Geneviève Chabot‐Roy, Mathieu Ferron, Sylvie Lesage

Bibliographic record

VenueImmunology and Cell Biology · 2022
Typearticle
Languageen
FieldImmunology and Microbiology
TopicT-cell and B-cell Immunology
Canadian institutionsMcGill UniversityUniversité de MontréalMontreal Clinical Research InstituteHôpital Maisonneuve-Rosemont
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiologyCoactivatorCell biologyT cellB cellZAP70CytokineTranscription factorHaematopoiesisInterleukin 21Immune systemImmunologyStem cellGeneticsGeneAntibody

Abstract

fetched live from OpenAlex

Abstract Pou2af1 encodes for OCA‐B, a coactivator of OCT‐1/2 transcription factors, which plays a key role in B‐cell maturation. The function of OCA‐B has also been studied in T cells, where T cells from Pou2af1−/− mice have impaired functions, such as cytokine production and T follicular helper (Tfh) differentiation. Arguably, some of these T‐cell phenotypes may result from impaired T–B interactions, secondary to the well‐documented B‐cell defects in Pou2af1−/− mice. Yet, Pou2af1 is actively transcribed in activated T cells, suggesting a T‐cell‐intrinsic role. To isolate the T‐cell‐intrinsic impact of Pou2af1, we generated Pou2af1fl/fl mice with specific genetic disruption of Pou2af1 either in all hematopoietic cells or exclusively in T cells. While we confirm that Pou2af1 is expressed in activated T cells, we surprisingly find that T‐cell cytokine production is not impaired in Pou2af1‐deficient T cells. Moreover, Pou2af1‐sufficient and Pou2af1‐deficient T cells have comparable transcriptome profiles, arguing against a T‐cell‐intrinsic role for Pou2af1. In line with these observations, we demonstrate that Tfh maturation is influenced by T‐cell‐extrinsic deletion of Pou2af1, as observed both in competitive bone marrow chimeras and in Pou2af1fl/fl mice with specific deletion in B cells. Overall, this study provides strong evidence that Pou2af1 does not act as a transcriptional coactivator in T cells, and conclusively demonstrates that loss of OCA‐B in B cells indirectly impacts Tfh differentiation, clarifying the role of OCA‐B in the immune system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.210
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2022
Admission routes2
Has abstractyes

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