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Record W4223919638 · doi:10.1002/lno.12086

Tight association between microbial eukaryote and giant virus communities in the Arctic Ocean

2022· article· en· W4223919638 on OpenAlexaboutno aff
Jun Xia, Sohiko Kameyama, Florian Prodinger, Takashi Yoshida, Kyoung‐Ho Cho, Jinyoung Jung, Sung‐Ho Kang, Eun Jin Yang, Hiroyuki Ogata, Hisashi Endo

Bibliographic record

VenueLimnology and Oceanography · 2022
Typearticle
Languageen
FieldEnvironmental Science
TopicBacteriophages and microbial interactions
Canadian institutionsnot available
FundersJapan Society for the Promotion of ScienceMinistry of EducationMinistry of Education, Culture, Sports, Science and Technology
KeywordsArcticSeawaterOceanographyCanada BasinOcean gyreDeep seaMicrobial population biologyMarine biologyCommunity structureEcologyEnvironmental scienceBiologyGeologySubtropics

Abstract

fetched live from OpenAlex

Abstract Viruses are important regulatory factors of the marine microbial community including microeukaryotes. However, little is known about their role in the northern Chukchi Sea in the Arctic basin, which has oligotrophic conditions in summer. To clarify the link between microbial eukaryotic communities and viruses as well as environmental conditions, we investigated the community structures of microeukaryotes (from 3 to144 μm and from 0.23 μm size bio‐particles collected from seawater) and Imitervirales (from 0.23 μm size bio‐particles collected from seawater), a dominant group of viruses infecting marine microeukaryotes. To the best of our knowledge, no study has investigated both Imitervirales and eukaryotic communities in the Arctic Ocean. Surface water samples were collected at 21 ocean stations located in the northeastern Chukchi Sea and an adjacent area outside the Beaufort Gyre (Adjacent Sea), and at two melt ponds on sea ice in the summer of 2018. At the ocean stations, nutrient concentrations were low in most of the locations, except the shelf in the adjacent sea. The community variations were significantly correlated between eukaryotes and Imitervirales, even within the northeastern Chukchi Sea characterized by relatively homogeneous environmental conditions. The association of the eukaryotic community with the viral community was stronger than that with geographical and physicochemical environmental factors. These results suggest that Imitervirales actively infect their hosts even in the cold and oligotrophic seawater in the Arctic Ocean.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.025
Threshold uncertainty score0.049

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.208
Teacher spread0.199 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2022
Admission routes1
Has abstractyes

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