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Record W4225140144 · doi:10.3389/fsysb.2022.893007

A Metataxonomic Analysis of Maple Sap Microbial Communities Reveals New Insights Into Maple Syrup Complexity

2022· article· en· W4225140144 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueFrontiers in Systems Biology · 2022
Typearticle
Languageen
FieldChemistry
TopicPlant-Derived Bioactive Compounds
Canadian institutionsUniversité Laval
FundersNatural Sciences and Engineering Research Council of CanadaMitacs
KeywordsMapleDormancyBiologyMaple syrup urine diseaseFood scienceBotanyAmino acidBiochemistry

Abstract

fetched live from OpenAlex

Maple syrup, an emblematic food product of Canada is produced from the concentration of sap collected from maple trees during spring. During this season, the trees come out of dormancy, which modifies sap composition. Meanwhile, microorganisms that contaminate sap as it is collected can also modify its composition. As these two factors can impact the quality of maple syrup, we aimed to better understand how microbial communities vary along dormancy release. We estimated the absolute abundance of bacteria and fungi in maple sap along a dormancy release index using high-throughput amplicon sequencing and digital droplet PCR (ddPCR). Several members were identified as indicators of maple sap composition, syrup organoleptic conformity and color, some of which are also hubs in the microbial association networks. We further explored bacterial communities by performing a predictive functional analysis, revealing various metabolic pathways correlated to dormancy release. Finally, we performed an experimental investigation of maple sap carrying capacity and limiting nutrients along dormancy release and found that maple sap composition variation influences its carrying capacity. Taken together, our results indicate that an increase in nitrogen supply in the form of allantoate combined with possible metabolite excretion could lead microbial communities towards different paths. Indeed, we observed a greater heterogeneity during late dormancy release which in turn could explain the variation in maple syrup quality. Further experimental investigation into the contribution of microbial, vegetal, environmental, technological, and processing factors to the final composition of maple syrup will be required to improve our understanding of this complex and flavorful food matrix and to develop quality control strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.667
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.250
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it