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Record W4226102233 · doi:10.21203/rs.3.rs-1365421/v1

Swift Formation Of Optimal Single Spheroids Towards In-Vitro 3-Dimensional Tumour Models

2022· preprint· en· W4226102233 on OpenAlexfundno aff
Kinana Habra, Joshua R. D. Pearson, Stéphanie McArdle

Bibliographic record

VenueResearch Square · 2022
Typepreprint
Languageen
FieldMedicine
TopicBiochemical effects in animals
Canadian institutionsnot available
FundersTrent UniversityCaraNottingham Trent University
KeywordsSpheroidIn vivoIn vitroConfocal microscopyCell biologyCell cultureCancer cellCellChemistryCellular pathologyBiologyCancerPathologyBiophysicsMedicineBiochemistry

Abstract

fetched live from OpenAlex

Abstract Introduction : Monolayer cell cultures, while useful for basic in vitro studies, are not physiologically relevant. Spheroids, on the other hand provide a more complex 3-dimensional (3D) structure which more closely resemble in vivo tumour growth thereby allowing results obtained with spheroids relating to proliferation, cell death, differentiation, metabolism, and various anti-tumour therapies to be more predictive of in vivo outcomes. Methods: The protocol herein presents a rapid and high throughput method for the generation of single spheroids whose applicability was demonstrated on various cancer cell lines including (U87 MG; SEBTA-027; SF188) brain cancer cells, (DU-145, TRAMP-C1) prostate cancer cells, and (BT-549, Py230) breast cancer in green coded 96-round bottom well plates. Results : Homogeneous compact spheroid morphology was evidenced as early as 24 hours after following the protocol. By using confocal microscopy and IncuCyte live imaging, the proliferating cells were traced in the rim and the dead cells were found inside the core region of the spheroid. H&E staining of spheroid slices and Western blotting were utilised to investigate the tightness of the cell packaging by adhesion proteins. Carnosine was used as an example of treatment for U87 single spheroids. Conclusions : This 5 step-protocol allows the rapid generation of spheroids, which will help towards reducing the number of tests performed on animals and encourage 3D modelling experiments from early-stage research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Research integrity
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.117
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.002
Research integrity0.0000.003
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.098
GPT teacher head0.399
Teacher spread0.301 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes1
Has abstractyes

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