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Record W4229035333 · doi:10.21203/rs.3.rs-1370330/v1

Catalytic-independent function of PARP-1 is essential in regulating human islet-cell differentiation from stem cells

2022· preprint· en· W4229035333 on OpenAlexafffund
Nidheesh Dadheech, Abhay Srivast, Rashmi G. Shah, Girish M. Shah, Sarita Gupta

Bibliographic record

VenueResearch Square · 2022
Typepreprint
Languageen
FieldMedicine
TopicPARP inhibition in cancer therapy
Canadian institutionsUniversité LavalUniversity of ManitobaUniversity of Alberta
FundersDepartment of Biotechnology, Ministry of Science and Technology, IndiaUniversité Laval
KeywordsPoly ADP ribose polymeraseBiologyCell biologyCancer researchStem cellIsletCellular differentiationPARP inhibitorEndocrinologyDiabetes mellitusPolymeraseGeneticsBiochemistryEnzyme

Abstract

fetched live from OpenAlex

Abstract Poly (ADP) Ribose Polymerase-1 (PARP-1), a fundamental DNA repair enzyme is known to regulate β cell death, replication, and insulin secretion. PARP-1 knockout (KO) mice are resistant to diabetes while PARP-1 overactivation contributes to β cell death. Additionally, PARP-1 inhibition improves diabetes complications in patients with type-2 diabetes. Despite these beneficial effects, the use of PARP-1 modulating agents in diabetes treatment are largely neglected, primarily due to the poorly studied mechanistic action of PARP-1 catalytic function in human β cell development. In the present study, we evaluated PARP-1 regulatory action in human β cell differentiation using the human pancreatic stem cell line, PANC-1. We surveyed islet census and histology from PARP-1 wild-type versus KO mice pancreas in head-to-head comparison with PARP-1 regulatory action for in-vitro β cell differentiation following either PARP-1 depletion or its pharmacological inhibition in PANC-1-differentiated islet cells. shRNA mediated PARP-1 depleted (SiP), or control replete (U6) PANC-1 cells were differentiated into islet-like clusters using established protocols. We observed complete abrogation of new β cell formation with absolute PARP-1 depletion while its catalytic inactivation using the strong inhibitor, PJ34, promoted the endocrine β cell differentiation and maturation. Immunohistochemistry and proteomics for key endocrine differentiation factors in addition to β cell maturation markers highlighted potential regulatory and augmented β cell differentiation due to non-catalytic function of PARP-1 elicited p-38 MAPK phosphorylation and Neurogenin-3 (Ngn3) re-activation. In summary, the study reestablishes a novel ability of catalytic independent action of PARP-1 in regulating islet cell differentiation and potential avenues for pilot clinical testing of PARP-1 inhibitors for β cell replacement therapies for the treatment of diabetes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.074
GPT teacher head0.393
Teacher spread0.319 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes2
Has abstractyes

Explore more

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