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Record W4231936344 · doi:10.3410/f.718050404.793488307

Faculty Opinions recommendation of Optogenetic inhibition of synaptic release with chromophore-assisted light inactivation (CALI).

2013· dataset· en· W4231936344 on OpenAlexfundno aff
Rohini Kuner, Linette Liqi Tan

Bibliographic record

VenueFaculty Opinions – Post-Publication Peer Review of the Biomedical Literature · 2013
Typedataset
Languageen
FieldNeuroscience
TopicPhotoreceptor and optogenetics research
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchNational Institutes of HealthNational Institute of Neurological Disorders and StrokeHoward Hughes Medical Institute
KeywordsOptogeneticsSynaptic vesicleNeuroscienceNeurotransmissionSynaptophysinHippocampal formationCell biologyBiophysicsNeurotransmitterBiologyChemistryBiochemistryCentral nervous systemMembraneVesicle

Abstract

fetched live from OpenAlex

Optogenetic techniques provide effective ways of manipulating the functions of selected neurons with light.In the current study, we engineered an optogenetic technique that directly inhibits neurotransmitter release.We used a genetically encoded singlet oxygen generator, miniSOG, to conduct chromophore assisted light inactivation (CALI) of synaptic proteins.Fusions of miniSOG to VAMP2 and synaptophysin enabled disruption of presynaptic vesicular release upon illumination with blue light.In cultured neurons and hippocampal organotypic slices, synaptic release was reduced up to 100%.Such inhibition lasted >1 hr and had minimal effects on membrane electrical properties.When miniSOG-VAMP2 was expressed panneuronally in Caenorhabditis elegans, movement of the worms was reduced after illumination, and paralysis was often observed.The movement of the worms recovered overnight.We name this technique Inhibition of Synapses with CALI (InSynC).InSynC is a powerful way to silence genetically specified synapses with light in a spatially and temporally precise manner.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.038
Threshold uncertainty score0.126

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0020.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.006
Science and technology studies0.0010.000
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0380.035

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.048
GPT teacher head0.351
Teacher spread0.303 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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Same venueFaculty Opinions – Post-Publication Peer Review of the Biomedical LiteratureSame topicPhotoreceptor and optogenetics researchFrench-language works237,207