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Record W4234534327 · doi:10.32920/ryerson.14638692

Visualization of Apoptotic Cells using Scanning Acoustic Microscopy and High Frequency Ultrasound

2021· preprint· en· W4234534327 on OpenAlexafffund
Sebastian Brand, GJ Czarnota, Michael C. Kolios, EC Weiss, R M Lemor

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldEngineering
TopicMicrofluidic and Bio-sensing Technologies
Canadian institutionsToronto Metropolitan University
FundersNatural Sciences and Engineering Research Council of CanadaOntario Innovation TrustCalifornia HIV/AIDS Research Program
KeywordsAcoustic microscopyHeLaApoptosisFluorescence microscopeMaterials scienceMicroscopyAttenuationUltrasoundFluorescenceBiomedical engineeringCellBiophysicsChemistryCell biologyOpticsBiologyPhysicsMedicineBiochemistryAcoustics

Abstract

fetched live from OpenAlex

<p></p><p>The goal of this project is to investigate changes in the acoustical properties of cells undergoing cell death for the development of a method for tissue apoptosis detection using high frequency ultrasound (10-60 MHz). A scanning acoustic microscope (SAM) was used for visualization of individual cells undergoing apoptosis (SASAM, Fraunhofer IBMT, Germany). The use of the SAM offers high resolution (1 μm spot size) and therefore enables the exploration of acoustical properties of the cell nucleus. Cells were labeled with H33342 and DIOC 3(5) for visualizing condensed chromatin and membranes in fluorescence microscopy. In addition the same cell lines interrogated microscopically were investigated using high frequency ultrasound. Recorded radio frequency (rf) data were analyzed using ultrasound spectroscopy. Integrated backscatter coefficients and attenuation values were computed for two cell lines: HeLa and MDCK. Both cell lines responded to the applied chemotherapeutic agent by apoptosis, assessed by fluorescence microscopy. Acoustical and optical microscopy using the SASAM system clearly enabled a differentiation between apoptotic cells and cells not responding to the treatment. Apoptotic cells displayed a higher contrast in the acoustic images and were less regular in shape. Optical images of the same cells showed nuclear condensation and membrane disruption. Spectral parameters estimated from rf ultrasound showed a 100% increase in the integrated backscatter coefficients for HeLa and MDCK. Attenuation values were increased by 50% to 70% for both cell lines as a function of treatment time. The results of this investigation provide a better understanding of changes in the acoustical properties of cells with cell death and thus to the development of a non-invasive method for measuring the treatment response of tumors using acoustic waves. </p><p></p>

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.198
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.248
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes2
Has abstractyes

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