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Record W4235110624 · doi:10.2135/cropsci2002.0343

Genetic Variation of RAPD Markers for North American White Clover Collections and Cultivars

2002· article· en· W4235110624 on OpenAlexaffabout
David L. Gustine, P. W. Voigt, E. Charles Brummer, Y. A. Papadopoulos

Bibliographic record

VenueCrop Science · 2002
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicRuminant Nutrition and Digestive Physiology
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsBiologyTrifolium repensRAPDCultivarPastureAnalysis of molecular varianceWhite (mutation)GermplasmDendrogramGenetic variationGenetic distanceBotanyAgronomyGenetic diversityPopulationGenetic structureDemographyGenetics

Abstract

fetched live from OpenAlex

New white clover (Trifolium repens L.) cultivars with improved winter hardiness and persistence are needed for pasture-based cropping systems in temperate regions of North America. This study evaluated, quantified, and compared genetic variation of populations developed from five recently collected germplasms from Georgia (GA), Iowa (IA), Pennsylvania (PA), West Virginia (WV), and Prince Edward Island (PEI), Canada, and three improved cultivars (‘Regal’, ‘Sacramento’, and ‘Will’). ‘Aurora’ alsike clover (T. hybridum L.) was included for comparison. Random amplified polymorphic DNA (RAPD) profiles of these populations were compared. Euclidean metric distance matrices were calculated for all possible pairwise combinations and were evaluated by analysis of molecular variance (AMOVA). An interpopulation distance matrix [Φst, an analog of F as described by Excoffier et al. (1992)] for the nine populations was used to calculate a dendrogram based on the unweighted paired group method of arithmetic averages. As anticipated, alsike clover was separated from white clover. At a higher level of similarity, the white clovers were separated into only two groups. One group consisted of GA, IA, PA, and PEI germplasms collected from long-established pastures. The second group included Regal, Sacramento, and Will cultivars and the WV collection. Although Will was originally derived from pasture collections, it has a larger leaf size than any of the five white clover collections. The surprising genetic similarities of eight populations derived from different climates and geographic regions of the continent may indicate a common European origin for much of the naturalized white clover in North American pastures.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.858
Threshold uncertainty score0.260

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.226
Teacher spread0.206 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2002
Admission routes2
Has abstractyes

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