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Probing cell behavior: Combining <scp>MEMS</scp> (microelectromechanical systems) technology with high resolution live cell imaging

2016· other· en· W4238155365 on OpenAlexaff
Anja Geitmann

Bibliographic record

VenueEuropean Microscopy Congress 2016: Proceedings · 2016
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Reproductive Biology
Canadian institutionsMcGill University
Fundersnot available
KeywordsPollen tubeMicrofluidicsLive cell imagingPollenMaterials scienceNanotechnologyMicroelectromechanical systemsBiophysicsCell biologyBiologyCellBotany

Abstract

fetched live from OpenAlex

Cell biological experimentation has benefitted from the development of microdevices based on microfluidics and MEMS (microelectromechanical systems) technology. These devices exploit the possibility to create microscopic 3D structures that can be used to manipulate single cells. Furthermore, microdevices can be used to miniaturize laboratory functions (Lab‐on‐a‐Chip). We developed an experimental platform with the specific aim to study tip growing cells, the TipChip [1]. The device allows positioning of single cells such as pollen grains or fungal spores at the entrances of serially arranged microchannels harboring microscopic experimental setups. The transport of the cells is mediated by fluid‐flow. Once positioned in the device, the tip growing cells, pollen tubes, filamentous yeast or fungal hyphae, can be exposed to chemical gradients, microstructural features, integrated biosensors or directional triggers. The device is compatible with Nomarski optics and fluorescence microscopy and can thus be used for live cell imaging. Using the TipChip platform we investigated the growth mechanism in pollen tubes. The pollen tube is a cellular transport system that is generated to connect the male gametophyte with its female counterpart. Through this catheter‐like protuberance the sperm cells are delivered from the pollen grain to the ovule nestled deep within the pistillar tissues. To be competitive, the pollen tube elongates extremely rapidly and it has to do so against the impedance of the apoplast of the transmitting tissue and through the maze of pistillar cells that separate the pollen grain from the ovule. Using calibrated micro‐cantilevers we quantified the invasive force of the pollen tube and we found that sperm cell discharge can be triggered by mechanical constriction [2]. Further applications include exposure of cells to precisely calibrated electric fields and micron‐sharp, tunable chemical gradients. The TipChip is therefore a highly versatile tool for the combined quantitative biophysical and optical investigation of polar growth in plant cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.244
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.212
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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