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Record W4239522949 · doi:10.26434/chemrxiv.9768095

Diverting Radical-Anionic C-H Amidation to a C-N/C-O Cascade for the Construction of Hydroxyisoindolines from Unprotected Amides

2019· preprint· en· W4239522949 on OpenAlexaff
Quintin Elliott, Gabriel dos Passos Gomes, Christopher J. Evoniuk, Igor V. Alabugin

Bibliographic record

VenueChemRxiv · 2019
Typepreprint
Languageen
FieldChemistry
TopicRadical Photochemical Reactions
Canadian institutionsUniversity of Toronto
FundersDivision of ChemistryAmerican Chemical Society Petroleum Research FundNational Science Foundation
KeywordsChemistryDeprotonationIntramolecular forceElectron transferMedicinal chemistryPhotochemistryOxygenRadicalStereochemistryIonOrganic chemistry

Abstract

fetched live from OpenAlex

An intramolecular C(sp3)-H amidation proceeds in the presence of t-BuOK, molecular oxygen, and DMF. The success of this reaction hinges on the deprotonation of a mildly acidic N-H bond and selective radical activation of a benzylic C(sp3)-H bond towards hydrogen atom transfer (HAT). DFT calculations suggest a thermodynamically favorable sequence of steps mediated by the generation of a radical-anion intermediate. As this intermediate starts to form a two-centered/three-electron (2c,3e)C-N bond, the extra electron is “ejected” into the π*-orbital of the aromatic core. The resulting cyclic radical-anion is readily oxidized by molecular oxygen to forge the C-N bond of the product. The transformation of a relatively weak reductant into a stronger reductant (i.e., “reductant upconversion”) allows one to use mild oxidants such as molecular oxygen. In contrast, the second stage of NH/CH activation forms a highly stabilized radical-anion intermediate incapable of electron transfer to molecular oxygen. Hence, the oxidation is impossible and an alternative reaction path opens via coupling between the radical anion intermediate and either superoxide or hydroperoxide radical. The hydroperoxide intermediate transforms into the final hydroxyisoindoline products under basic conditions. The use of TEMPO as an additive was found to activate less reactive amides. The combination of experimental and computational data outlines a conceptually new mechanism for the conversion of unprotected amides into hydroxyisoindolines proceeding as a sequence of C-H amidation and C-H oxidation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.270
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2019
Admission routes1
Has abstractyes

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