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Record W4239725289 · doi:10.1139/b02-017

Demystifying suberin

2002· article· en· W4239725289 on OpenAlexfundvenueno aff
Mark A. Bernards

Bibliographic record

VenueCanadian Journal of Botany · 2002
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Surface Properties and Treatments
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsSuberinHydroxycinnamic acidLigninCell wallMonolignolChemistryCoumaric acidOrganic chemistryCovalent bondBioorganic chemistryPolyesterFerulic acidBiochemistryAntioxidantBiosynthesisEnzyme

Abstract

fetched live from OpenAlex

Suberin is a term used to define a specific cell wall component that occurs, for example, in phellem (cork) endodermal and exodermal cells and is characterized by the deposition of both poly(phenolic) and poly(aliphatic) domains. Historically, the poly(phenolic) domain has been likened to lignin, and while there is an element of truth to this comparison, recent evidence supports an alternative view in which the poly(phenolic) domain contains a significant amount of nonlignin precursors (principally hydroxycinnamic acids and their derivatives) that are covalently linked to each other in a manner analogous to the monolignols in lignin. Similarly, the conceptual model in which the poly(aliphatic) domain of suberized tissues is represented as a random network of polyesterified, modified fatty acids and alcohols has been replaced with one comprising a three-dimensional, glycerol-bridged network. Taken together, a new model for suberin is emerging in which a hydroxycinnamic acid – monolignol poly(phenolic) domain, embedded in the primary cell wall, is covalently linked to a glycerol-based poly(aliphatic) domain located between the primary cell wall and the plasma membrane. The structural and biochemical evidence supporting this new suberin paradigm are examined in this minireview, along with the presentation of a new structural model encompassing a current view of the structure of suberin.Key words: suberin, lignin, hydroxycinnamic acid, monolignol, poly(aliphatic) domain, poly(phenolic) domain, glycerol polyester.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.165
Teacher spread0.126 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations455
Published2002
Admission routes2
Has abstractyes

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