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<i> <scp>B</scp> eijerinckiaceae </i>

2016· other· en· W4241012665 on OpenAlexaff
Svetlana N. Dedysh, Peter F. Dunfield

Bibliographic record

VenueBergey's Manual of Systematics of Archaea and Bacteria · 2016
Typeother
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsAlphaproteobacteriaBiologyProteobacteriaFacultativeActinobacteriaType genusBacteriaMicrobiologyBotanyGenusType speciesGenetics16S ribosomal RNA

Abstract

fetched live from OpenAlex

Abstract Beij.e.rinck.i.a.ce'ae. N.L. fem. n. Beijerinckia type genus of the family; ‐ aceae ending to denote family; N.L. fem. pl. n. Beijerinckiaceae the Beijerinckia family. The family Beijerinckiaceae accommodates Gram‐negative, aerobic, non‐spore‐forming, moderately acidophilic bacteria, which divide by binary or irregular fission. Most family members produce polysaccharide capsules, form poly‐β‐hydroxybutyrate granules, and are capable of fixing dinitrogen. They are mesophilic and psychrotolerant bacteria. The major fatty acid is C 18:1 ω7 c . Members of this family display extremely versatile metabolic types including chemoheterotrophs, facultative methylotrophs, facultative and obligate methanotrophs, and anoxygenic phototrophs. All genera in this family include representatives with C1 metabolic capabilities. Habitats are acidic wetlands and soils. DNA G + C content (mol%) : 54.7–65.3. Type genus : Beijerinckia Derx 1950, 145 AL . Taxonomic and Nomenclature Notes According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the family Beijerinckiaceae is: correct name (last update, April 2026) * . LPSN classification: Bacteria / Pseudomonadati / Pseudomonadota / Alphaproteobacteria / Hyphomicrobiales / Beijerinckiaceae The family Beijerinckiaceae can also be recovered in the Genome Taxonomy Database (GTDB) as f__Beijerinckiaceae (version v232) ** . GTDB classification: d__Bacteria / p__Pseudomonadota / c__Alphaproteobacteria / o__Rhizobiales / f__Beijerinckiaceae * Freese , H.M. , Meier‐Kolthoff , J.P. , Sardà Carbasse , J. , Afolayan , A.O. , Göker , M. ( 2026 ). TYGS and LPSN in 2025: a Global Core Biodata Resource for genome‐based classification and nomenclature of prokaryotes within DSMZ Digital Diversity. Nucleic Acids Res , 54 (), D884 – D891 ; doi: 10.1093/nar/gkaf1110 ** Parks , D.H. , Chaumeil , P.‐A. , Mussig , A.J. , Rinke

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.091
Threshold uncertainty score0.303

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.003
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0910.032

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.230
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2016
Admission routes1
Has abstractyes

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