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Record W4242520249 · doi:10.21203/rs.3.rs-26264/v1

Compartmentalized mathematical model to predict future number of active cases and deaths of COVID-19

2020· preprint· en· W4242520249 on OpenAlexaff
Osmar Pinto Neto, José Clark Reis, Ana Carolina Brisola Brizzi, Gustavo José Zambrano, Joabe Marcos de Souza, Wellington Pedroso Estevam de Amorim, Rodrigo Cunha de Mello Pedreiro, Bruno de Matos Brizzi, Ellysson Oliveira Abinader, Renato Amaro Zângaro

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldMathematics
TopicCOVID-19 epidemiological studies
Canadian institutionsL'Alliance Boviteq
Fundersnot available
KeywordsCoronavirus disease 2019 (COVID-19)2019-20 coronavirus outbreakSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Computer scienceEconometricsVirologyMathematicsBiologyMedicineInternal medicineOutbreakInfectious disease (medical specialty)

Abstract

fetched live from OpenAlex

Abstract In December 2019, China reported a series of atypical pneumonia cases caused by a new Coronavirus, called COVID-19. In response to the rapid global dissemination of the virus, on the 11th of Mars, the World Health Organization (WHO) has declared the outbreak a pandemic. In light of this situation, this paper intends to analyze and improve the current SEIR models to better represent the behavior of the COVID-19 and accurately predict the outcome of the pandemic in a given social, economic and political scenario. We present a novel generalized Susceptible-Exposed-Infected-Recovered (SEIR) compartmental model and test it using a global optimization algorithm with data collected from the WHO. Our main results were: (a) our model was able to accurately fit the data of all countries tested (b) it is possible to predict values for one week ahead with errors in the order of 15% for the number of cases and 30% in the number of deaths for all countries; (c) predictions are better for countries where the active cases curve already reached the maximum; the error being in the order of 10% in the number of cases and 20% in the number of deaths; (d) for countries where the active curve is still growing, different optimization solutions can be found that fit the data; so, to predict future behavior in this scenarios some of the model coefficients should be estimated from outside sources or based on generalized results from other countries according to their health policies of social distance, quarantining and case test and tracing.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.033
Threshold uncertainty score0.066

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.373
GPT teacher head0.489
Teacher spread0.117 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2020
Admission routes1
Has abstractyes

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