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Record W4246785612 · doi:10.1093/neuonc/nov228.28

PTPS-28INHIBITION OF LACTATE DEHYDROGENASE-A USING SODIUM OXAMATE LEADS TO METABOLIC CHANGES, DECREASED GROWTH AND MIGRATION IN MEDULLOBLASTOMA CELL LINES

2015· article· en· W4246785612 on OpenAlexaff
Cara Valvona, Laura Donovan, Helen L. Fillmore, Geoffrey J. Pilkington

Bibliographic record

VenueNeuro-Oncology · 2015
Typearticle
Languageen
FieldMaterials Science
TopicSupramolecular Self-Assembly in Materials
Canadian institutionsHospital for Sick Children
Fundersnot available
KeywordsMedulloblastomaLactate dehydrogenaseSodiumSodium lactateCell biologyChemistryBiologyCancer researchBiochemistryEnzyme

Abstract

fetched live from OpenAlex

Integrated genomic data has identified four distinct Medulloblastoma (MB) sub-groups differing in clinical outcomes, of which group 3 is the most frequently metastatic and characteristically over-expresses cMyc. Lactate dehydrogenase A (LDHA), known for its key role in metabolic functions, is a downstream target of cMyc and HIF1α. We hypothesised LDHA inhibition would influence a change from a glycolytic to an oxidative phosphorylation phenotype, thus leading to decreased MB viability and migration. LDHA protein was examined in MB cell lines (Res256 and UW402) using IHC, Flow cytometry and Western blot. Lactate and pyruvate concentrations, viability, and proliferation were evaluated in the presence or absence of sodium oxamate under normoxic and hypoxic conditions. MB migration (gap-closure) and distance travelled (cell-tracking) was measured using live cell imaging. LDHA expression was elevated under hypoxic conditions in MB cells. LDHA activity was inhibited by sodium oxamate causing a concentration and time dependent decrease in lactate concentration. Significance varied depending on normoxic versus hypoxic conditions (p < 0.05-p < 0.001). Under hypoxic conditions, pyruvate levels also decreased with LDHA inhibition (p < 0.05). Sodium oxamate significantly reduced proliferation and increased the percentage of MB cells in G2/M cell cycle phase. Sodium oxamate treatment also caused a significant decrease in MB migration in a concentration/time dependent manner that was not dependent on reduced proliferation. Inhibition of LDHA activity by sodium oxamate significantly decreased lactate concentrations and significantly inhibited MB migration and proliferation. Targeting MB metabolism through LDHA is a promising approach, which could prevent the use of harsh therapy regimens, and warrants further investigation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.287
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2015
Admission routes1
Has abstractyes

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