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Record W4247924870 · doi:10.21203/rs.3.rs-35253/v1

Identification, Characterization and Functional Analysis of AGAMOUS Subfamily Genes Associated with Floral Organs and Seed Development in Marigold (Tagetes erecta)

2020· preprint· en· W4247924870 on OpenAlexaff
Chunling Zhang, Ludan Wei, Wen‐Jing Wang, Wenquan Qi, Zhe Cao, Hang Li, Manzhu Bao, Yanhong He

Bibliographic record

VenueResearch Square · 2020
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant biochemistry and biosynthesis
Canadian institutionsUniversity of Saskatchewan
FundersFundamental Research Funds for the Central UniversitiesNational Natural Science Foundation of China
KeywordsAgamousBiologyGynoeciumSubfamilyPetalStamenArabidopsisBotanyGeneHomeotic geneOvuleEctopic expressionGeneticsTranscription factorPollen

Abstract

fetched live from OpenAlex

Abstract Background: AGAMOUS (AG) subfamily genes regulate the floral organs initiation and development, fruit and seed development. At present, there has been insufficient study to explain the function of the AG subfamily genes in Asteraceae. Marigold (Tagetes erecta), belonging to Asteraceae family, has become an important research target for understanding floral organ development in plants.Results: Four AG subfamily genes of marigold were isolated and phylogenetically grouped into C class (TeAG1 and TeAG2) and D class (TeAGL11-1 and TeAGL11-2) genes according to the ABCDE flower organ development model. And these four genes were highly expressed in reproductive organs of marigold. Subcellular localization analysis suggested that all the four proteins were located in the nucleus. Protein-protein interactions analysis indicated that C class proteins had a wider interaction manner than D class proteins. Function analysis by ectopic expression in Arabidopsis revealed that TeAG1 and TeAGL11-1 displayed a C function specifying the stamen identity and carpel identity, and a D function regulating seed development and petal development, respectively. In addition, overexpression of TeAG1 or TeAGL11-1 also leaded to curling rosette leaf and early flowering in Arabidopsis.Conclusions: Our results provide molecular mechanism of AG subfamily genes for the development of stamens, pistils and ovules in Asteraceae, and technical support for the subsequent manipulate of several floral traits.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.278
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2020
Admission routes1
Has abstractyes

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