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Record W4248200329 · doi:10.1093/auk/121.3.682

Vicariant Speciation of Curassows (Aves, Cracidae): A Hypothesis Based on Mitochondrial DNA Phylogeny

2004· article· en· W4248200329 on OpenAlexaff
Sérgio L. Pereira, Allan J. Baker

Bibliographic record

VenueThe Auk · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsRoyal Ontario MuseumUniversity of Toronto
Fundersnot available
KeywordsVicarianceBiologyAllopatric speciationMonophylyPhylogenetic treePhylogeneticsZoologyEvolutionary biologyCladeGenusGeneGeneticsPopulation

Abstract

fetched live from OpenAlex

Abstract The curassows comprise 14 species of sedentary Neotropical birds classified in four genera (Crax, Nothocrax, Mitu, and Pauxi) in the family Cracidae. Congeneric species have a striking pattern of allopatric distributions that might be attributable to vicariance, dispersal, or a combination of the two. To test those biogeographic hypotheses, a strongly supported phylogeny was needed, so that existing problems of taxonomic rank could be solved and a better understanding of the group's evolutionary history attained. We therefore estimated the phylogenetic relationships of all 14 species, on the basis of 6,929 sites of six different mitochondrial DNA regions, and reassessed the status of the four genera. Sequences from the ND4 gene favored a tree that was highly incongruent with the tree recovered using the other five gene regions. However, when the ND4 sequences were concatenated with the sequences of the other genes, the optimal phylogeny was unchanged from that derived for the other genes. That combined tree was divided into two well-supported clades: one containing the seven species of Crax and the other containing the monospecific genus Nothocrax, as sister to a clade of the Mitu and Pauxi species. Mitu and Pauxi are not reciprocally monophyletic, which appears to be attributable to a distant hybridization event and a transfer of Mitu mtDNA into P. unicornis. We estimated divergence times; the diversification of curassow seems to have occurred from the Middle Miocene to the end of the Pliocene (9.5 to 1.6 Ma). Vicariance—following marine transgressions, the rise of the Andes, and subsequent changes in river basins in South America—seems to be the major mode of isolation that favored allopatric speciation in the group.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.151
Threshold uncertainty score0.272

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.211
Teacher spread0.199 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2004
Admission routes1
Has abstractyes

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