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Record W4248288596 · doi:10.21203/rs.3.rs-117842/v1

Diaphragm Satellite Cells Isolation by Optimized MACS and the Effect of Mechanical Ventilation on their Proliferation and Differentiation Characteristics through MyoD and Myogenin Pathways

2020· preprint· en· W4248288596 on OpenAlexaff
Junying Ding, Qian Li, Feng‐Xia Liang, Salyan Bhattarai, Qingquan Liu

Bibliographic record

VenueResearch Square · 2020
Typepreprint
Languageen
FieldMedicine
TopicCongenital Diaphragmatic Hernia Studies
Canadian institutionsMcGill University Health Centre
Fundersnot available
KeywordsMyogeninMyoDSatelliteIsolation (microbiology)Cell biologyDiaphragm (acoustics)MyogenesisChemistryBiologyEngineeringAerospace engineeringBioinformaticsMyocyteElectrical engineering

Abstract

fetched live from OpenAlex

Abstract Objective: In the present study, we aimed to establish a feasible method to isolate single diaphragm satellite cells from C57 mice, and clarify the effect of mechanical ventilation (MV) on the proliferation and differentiation of diaphragm satellite cells. Moreover, the underlying molecular mechanism was also explored.Methods: After the dissection of the diaphragm, enzymolysis, and specific antibody selection, single diaphragm satellite cells were harvested from C57 mice receiving 6 h of MV or not with optimized magnetic-activated cell sorting (MACS) approach. The cells were stained with BrdU or labeled with the differentiation antibody MYH3, followed by observation using fluorescence microscopy. The cells were counted from randomly selected visual fields, and the proliferation or differentiation characteristics of the control and MV groups were compared by IMAGE software. Besides, the expressions of MyoD and myogenin were detected by quantitative real-time PCR (qRT-PCR). Results: The single diaphragm satellite cells were successfully purified through MACS using a set of optimized parameters. Generally speaking, 1.5×105 cells could be harvested from a single diaphragm. Upon MV, the proliferation rate of diaphragm satellite cells was decreased from 88.74% to 81.92%, while the differentiation rate was increased from 17.94% to 27.58%. Moreover, the expressions of MyoD and myogenin were significantly up-regulated upon MV. Conclusions: In our current work, an efficient method was successfully established to isolate single diaphragm satellite cells. After MV, the differentiation rate of diaphragm satellite cells tended to increase, and the expressions of MyoD and myogenin were up-regulated. Collectively, our findings provided valuable insights into further research and clinical target treatment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.323
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2020
Admission routes1
Has abstractyes

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