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Peer Review #1 of "Preferences for achromatic horizontal, vertical, and square patterns in zebrafish (Danio rerio) (v0.1)"

2017· peer-review· en· W4252103045 on OpenAlexafffund
Lisa Rimstad, Adam Holcombe, Alicia Pope, Trevor J. Hamilton, Melike Schalomon

Bibliographic record

Venuenot available
Typepeer-review
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicZebrafish Biomedical Research Applications
Canadian institutionsMacEwan UniversityWomen and Children’s Health Research InstituteUniversity of Alberta
FundersMacEwan University
KeywordsDanioAchromatic lensSquare (algebra)ZebrafishHorizontal and verticalMathematicsFisheryBiologyGeometryPhysicsOpticsGenetics

Abstract

fetched live from OpenAlex

The zebrafish (Danio rerio) is gaining popularity as a laboratory organism and is used to model many human diseases.Many behavioural measures of locomotion and cognition have been developed that involve the processing of visual stimuli.However, the innate preference for vertical and horizontal stripes in zebrafish is unknown.We tested the preference of adult zebrafish for three achromatic patterns (vertical stripes, horizontal stripes, and squares) at three different size conditions (1, 5, and 10 mm).Each animal was tested once in a rectangular arena, which had a different pattern of the same size condition on the walls of either half of the arena.We show that zebrafish have differential preferences for patterned stimuli at each of the three size conditions.These results suggest that zebrafish have naïve preferences that should be carefully considered when testing zebrafish in paradigms using visual stimuli.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.066
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: Evaluation · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.993
Threshold uncertainty score0.954

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.066
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.002
Science and technology studies0.0040.001
Scholarly communication0.0050.004
Open science0.0030.004
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.3310.224

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.377
Teacher spread0.327 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
DomainEvaluation
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes2
Has abstractyes

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