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SYSTEMATICS OF <i>PRASIOLA</i> AND PHYLOGENETIC POSITIONING OF THE PRASIOLALES (CHLOROPHYTA)

2001· article· en· W4253645360 on OpenAlexaboutno aff

Bibliographic record

VenueJournal of Phycology · 2001
Typearticle
Languageen
FieldChemistry
TopicAnalytical Chemistry and Chromatography
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyHerbariumUPGMASystematicsPhylogenetic treeMaximum parsimonyBotanyGenusSubgenusMolecular phylogeneticsCladeRange (aeronautics)Evolutionary biologyTaxonomy (biology)Genetic variationGeneticsGene

Abstract

fetched live from OpenAlex

Sherwood, A. R.1 & Sheath, R. G.2 1Present address: Department of Botany, 3190 Maile Way, University of Hawaii, Honolulu, HI 96822 U.S.A. 2Department of Botany and Dean's Office, University of Guelph, Guelph, ON N1G 2W1 Canada The systematics of the green algal genus Prasiola was investigated through a combination of morphometric and molecular analyses, and the phylogenetic position of the order Prasiolales was re‐examined with molecular tools. Thirty‐six herbarium sheets of Prasiola as well as 39 field collections and 12 type specimens were measured for several cellular and thallus characters. Means of each character were used in both cluster (UPGMA algorithm) and principal components analyses (PCA) to examine relationships among collections. Significant differences among means from the resulting groups were tested using one‐way analysis of variance (ANOVA; p<0.05). Both cluster analysis and PCA resolved five groups of specimens, of which four groups were associated with at least one type specimen. Parsimony and distance analyses of the first half of the 18S rRNA gene support the Prasiolales as being a sister clade to the Trebouxiophyceae. Uncorrected sequence divergence values within the Prasiolales range from 0‐1.7%, and within Prasiola range from 0‐1.4%. Analyses of the rbcL gene were not well resolved at the ordinal level, but revealed some interesting trends within and among the genera, such as sequence identity among several morphologically distinct marine species of Prasiola, and large sequence divergence values between marine and freshwater Prasiola. Inclusion of representatives of the other members of the Prasiolales (Rosenvingiella, Prasiococcus and Prasiolopsis) confirmed that the Prasiolales is a monophyletic group.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.219
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2001
Admission routes1
Has abstractyes

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