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Record W4256735853 · doi:10.1017/s0016672306008317

Abstracts of papers presented at the sixteenth Genetics Society's Mammalian Genetics and Development Workshop held at the Institute of Child Health, University College London on 21 and 22 November 2005

2006· article· en· W4256735853 on OpenAlexfundno aff
Andrew J. Copp, Elizabeth Fisher

Bibliographic record

VenueGenetics Research · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCongenital limb and hand anomalies
Canadian institutionsnot available
FundersMedical Research CouncilCanadian Institutes of Health ResearchNational Institutes of HealthMichael Smith Health Research BCBritish Heart FoundationWellcome Trust
KeywordsNeuroepithelial cellNeural tubeNeural foldExencephalyAnatomyBiologyCranial neural crestNeuroscienceNeurulationNeural crestDorsumNeural plateCell biologyEmbryoEmbryonic stem cellGeneticsEmbryogenesisGastrulationTeratology

Abstract

fetched live from OpenAlex

Prior to cranial neural tube closure, the neural folds adopt a biconvex morphology which is thought to be due to expansion of the underlying mesenchyme. Dorso-lateral hinge points (DLHPs) then form, which allow the dorsal tips of the neural folds to ‘flip around’ resulting in apposition of the tips and facilitating subsequent fusion. Cranial closure is particularly prone to perturbation, leading to exencephaly in many mouse mutants and as a result of a variety of teratogenic influences. This may reflect mechanical tensions affecting the closing cranial neural folds. For example, the presence of ventral flexures of the body axis at the mid- and forebrain levels mechanically opposes the formation of DLHPs. Several processes have been implicated as important in overcoming these mechanical tensions, thereby assisting in cranial neural tube closure. These include contraction of actin microfilaments at the luminal surface of the neuroepithelium and apoptosis in the dorsal and dorsolateral neuroepithelium. The latter may act to increase flexibility in the dorsal neural folds, enhancing DLHP formation. Neural crest cells (NCC) originate in the dorsal tips of the neuroepithelium and undergo an epithelial-to-mesenchymal transition, allowing them to delaminate, exit the neuroepithelium and migrate extensively throughout the embryo to form numerous derivatives. We hypothesized that delamination of the NCC from the neuroepithelium may enhance the mechanical flexibility of the dorsal tips of the neural folds, allowing the ‘flip around’ event to occur.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.407
Threshold uncertainty score0.846

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.002
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0030.001
Science and technology studies0.0010.001
Scholarly communication0.0030.001
Open science0.0010.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.4070.128

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.277
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2006
Admission routes1
Has abstractyes

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