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Record W4281976759 · doi:10.3233/shti220140

Implementing Predictive Models Within an Electronic Health Record System: Lessons from an External Validation of a Suicide Risk Model

2022· article· en· W4281976759 on OpenAlexafffund
Lydia Sequeira, Douglas McNair, David Wiljer, Gillian Strudwick, Vincenzo De Luca, Kanakasaba Kailasam, Michael A. Thompson, Brian Chou, John S. Strauss

Bibliographic record

VenueStudies in health technology and informatics · 2022
Typearticle
Languageen
FieldComputer Science
TopicMachine Learning in Healthcare
Canadian institutionsIsland HealthUniversity Health NetworkCentre for Addiction and Mental Health
FundersCentre for Addiction and Mental Health
KeywordsDocumentationContext (archaeology)Computer scienceSample (material)Predictive modellingModel validationData scienceData miningMachine learning

Abstract

fetched live from OpenAlex

Over the past 5 years, there has been an increase in the development of EHR-based models for predicting suicidal behaviour. Using the McGinn (2000) framework for creating clinical prediction rules, this study discusses the broad validation of one such predictive model in a context external to its derivation. Along with reporting performance metrics, our paper high-lights five practical challenges that arise when trying to undertake such a project including (i) validation sample sizes, (ii) availability and timeliness of data, (iii) limited or incomplete documentation for predictor variables, (iv) reliance on structured data and (v) differences in the source context of algorithms. We also discuss our study in the context of the current literature.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.138
metaresearch head score (Gemma)0.393
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.138
Threshold uncertainty score0.732

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1380.393
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0020.003
Scholarly communication0.0060.005
Open science0.0040.006
Research integrity0.0020.005
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.057
GPT teacher head0.389
Teacher spread0.332 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes2
Has abstractyes

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