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Record W4285029755 · doi:10.1139/cjps-2022-0046

Correlations between soybean seed quality traits using a genome-wide association study panel grown in Canadian and Ukrainian mega-environments

2022· article· en· W4285029755 on OpenAlexaffvenueabout
Huilin Hong, Mohsen Yoosefzadeh-Najafabadi, Istvan Rajcan

Bibliographic record

VenueCanadian Journal of Plant Science · 2022
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoybean genetics and cultivation
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsBiologyBiplotOleic acidTraitStearic acidQuantitative trait locusPalmitic acidAgronomyGenetic correlationLinolenic acidGenotypeBiotechnologyFatty acidGenetic variationBotanyLinoleic acidGeneGeneticsChemistry

Abstract

fetched live from OpenAlex

Improvement of soybean [ Glycine max (L.) Merr.] seed quality traits in addition to agronomic traits requires a detailed understanding of correlations between these traits. The objective of this study was to determine the correlations between seed compositions in soybeans grown in Canadian and Ukrainian mega-environments (MEs). The correlations between seed quality traits and agronomic traits were also studied. A genome-wide association study panel consisting of 184 soybean accessions was used for the study. The panel was grown in three Ontario field locations and two Ukrainian locations for 2 years, from 2018 to 2019. A total of 18 traits were measured and analyzed. The Pearson's correlation coefficients ( r) were calculated, and the genotype-by-trait biplots were generated to analyze the linear correlations between the traits. The well-documented negative correlations between protein and oil, as well as oil and the amino acids Lys, Cys, Met, and Thr, were confirmed. In addition, a positive correlation was observed between stearic acid and palmitic acid, while linolenic acid and oleic acid concentrations were negatively correlated. Sucrose was positively correlated with linolenic acid and raffinose and negatively with protein and the four amino acids. Most of the agronomic traits had positive correlations with each other, while there was no strong linear association detected between agronomic traits and the seed quality traits in either ME. The results of this study suggest that improvement of yield and other agronomic traits through breeding may be possible in both Canada and Ukraine without affecting the important seed quality traits.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.510
Threshold uncertainty score0.865

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.237
Teacher spread0.178 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2022
Admission routes3
Has abstractyes

Explore more

Same venueCanadian Journal of Plant ScienceSame topicSoybean genetics and cultivationFrench-language works237,207