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Record W4285225789 · doi:10.5376/mpb.2022.13.0013

Cloning and Expression Analysis of <i>NAC2</i> Gene of Potato (<i>Solanum tuberosum L</i>)

2022· article· en· W4285225789 on OpenAlexvenueno aff
Lulu Meng, Guandi He, Weijun Tian, Dandan Li, Yun Huang, Tengbing He

Bibliographic record

VenueMolecular Plant Breeding · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Gene Expression Analysis
Canadian institutionsnot available
FundersNational Natural Science Foundation of China
KeywordsGeneGene expressionBiologyMolecular biologyComplementary DNAGenetics

Abstract

fetched live from OpenAlex

NAC is one of the unique transcription factor families in plants, which plays an important regulatory role in response to abiotic stress. In this study, a NAC transcription factor gene StNAC2 was cloned in potato ‘Yunshu 505’ by RT-PCR. Sequence analysis showed that the ORF of StNAC2 gene was 876 bp, encoding 291 amino acids, including a conserved Nam domain with a molecular weight of 33.585 12 kD, a theoretical isoelectric point of 7.04, an instability coefficient of 50.33 and an average hydrophilic number of -0.660. Protein prediction results showed that StNAC2 protein is an unstable hydrophilic protein with no signal peptide and transmembrane domain, which can be expressed in both cytoplasm and mitochondria. Homology comparison and phylogenetic tree analysis showed that StNAC2 gene is closely related to Capsicum annuum and Nicotiana tab acum. Spatio-temporal expression results showed that the expression of StNAC2 gene was different in tissue, the expression of StNAC2 gene was higher in leaves than in stems. The expression of StNAC2 gene was induced under cadmium stress, and reached the maximum value at 50 mg/kg, but decreased significantly after being treated with 100 mg/kg cadmium, indicating that the expression of StNAC2 gene was inhibited under high concentration stress and StNAC2 gene could involve in cadmium stress. The results lay the foundation for dissecting the molecular mechanism of StNAC2 gene involved in Cd stress response.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.219
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes1
Has abstractyes

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