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Record W4288056712 · doi:10.1016/j.mlwa.2022.100387

ABC: Artificial Intelligence for Bladder Cancer grading system

2022· article· en· W4288056712 on OpenAlexaff
Khashayar Habibi, Kayvan Tirdad, Alex Dela Cruz, Kenneth Wenger, Andrea Mari, Mayada Basheer, Cynthia Kuk, Bas W.G. van Rhijn, Alexandre R. Zlotta, Theodorus van der Kwast, Alireza Sadeghian

Bibliographic record

VenueMachine Learning with Applications · 2022
Typearticle
Languageen
FieldMedicine
TopicBladder and Urothelial Cancer Treatments
Canadian institutionsSinai Health SystemToronto General HospitalToronto Metropolitan UniversityUniversity of Toronto
Fundersnot available
KeywordsGrading (engineering)Computer scienceBladder cancerArtificial intelligenceDeep learningResidual neural networkArtificial neural networkMedical physicsCancerMedicineEngineering

Abstract

fetched live from OpenAlex

Bladder cancer tissue grading, which assigns a numerical grade reflecting how aggressive a tumor looks under a microscope, is essential to determine the proper course of treatment, design a therapeutic plan and determine prognosis. The major problem is that there are considerable and clinically relevant variations in grading by pathologists – as they are humans with different opinions and experience – including in bladder cancer. This work presents a solution, i.e., Artificial Intelligence for Bladder Cancer grading (ABC) system, that is developed based on deep neural network architectures to provide a more reliable and accurate diagnosis for patients affected by this deadly disease and ultimately improve management and clinical outcomes. Whole Slide Images (WSI) are split up into equally-sized square tiles and annotated to build a training dataset. ABC introduces a new grading system concept that can provide a percentage distribution of each different grade in a specific tumor, unlike the current numerical grade value between 1 and 3 based on the general impression of the pathologist. This new approach aims to provide a more granular grading of bladder cancer tissues and better capture tumor grade heterogeneity. This new concept may offer a more precise prognosis and optimize management in the future. The ABC learning model is fully configurable, and any deep architecture model can be trained and used by ABC. Some trained models developed by ABC have shown high accuracy and consistency in grading and intra-observer variability. The combination of a loosely coupled architecture and fully integrated tiles’ utilization makes ABC a universal, scalable, and versatile system that could be configured and deployed worldwide.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.008
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0050.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.312
Teacher spread0.283 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2022
Admission routes1
Has abstractyes

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