MétaCan
Menu
Back to cohort
Record W4291190331 · doi:10.17615/vy5z-sw50

Environmental conditions and phytoplankton dynamics associated with Pseudo-nitzschia abundance and domoic acid in the Juan de Fuca eddy

2022· article· en· W4291190331 on OpenAlexfundaboutno aff
P.J. Harrison, V.L. Trainer, A. Marchetti

Bibliographic record

VenueUNC Libraries · 2022
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine Toxins and Detection Methods
Canadian institutionsnot available
FundersNorthwest Fisheries Science CenterDivision of Ocean SciencesNatural Sciences and Engineering Research Council of CanadaUniversity of California, Davis
KeywordsDomoic acidPhytoplanktonOceanographyAbundance (ecology)Environmental scienceFisheryEcologyGeographyBiologyGeology

Abstract

fetched live from OpenAlex

The Juan de Fuca eddy, located off the coasts of Washington (USA) and British Columbia (Canada), has been identified as a region that frequently contains relatively high levels of domoic acid (DA), a toxin produced by some members of the marine diatom genus, Pseudo-nitzschia. This seasonal eddy provides a unique environment to study the influence of nutrients on Pseudo-nitzschia abundance and DA accumulation in the field. Vertical sampling in the Juan de Fuca region was conducted in May, July and September of 2001 in an effort to determine environmental conditions and phytoplankton dynamics within the eddy compared to surrounding waters. The eddy was characterized by high primary productivity and high biomass in May and September relative to surrounding waters and was dominated by diatoms in the > 5 μm size-fraction. In May, nitrate (NO3-) concentrations and the corresponding NO3- assimilation rates by phytoplankton within the eddy surface waters were relatively low. In contrast, in September, NO3- was high and NO3- assimilation rates increased by 7 times relative to those in May. DA was below detection levels at all stations in May and July. In September, Pseudo-nitzschia reached highest cell densities (∼2 × 104 cells l-1) and particulate DA (∼30 ng DA equivalents l-1) was detected in surface waters of the eddy. The presence of DA in healthy growing phytoplankton communities indicates a need to examine other environmental conditions that induce DA production in natural Pseudo-nitzschia populations than have previously been reported in nutrient-stressed laboratory studies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.089
Threshold uncertainty score0.178

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.195
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2022
Admission routes2
Has abstractyes

Explore more

Same venueUNC LibrariesSame topicMarine Toxins and Detection MethodsFrench-language works237,207