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Record W4292836407 · doi:10.3389/fmars.2022.975184

Long-term adaptive response of an oceanic diatom to copper deficiency

2022· article· en· W4292836407 on OpenAlexafffund
Liangliang Kong, Neil M. Price

Bibliographic record

VenueFrontiers in Marine Science · 2022
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsMcGill University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsPhytoplanktonDiatomNutrientAssimilation (phonology)PhotosynthesisPopulationCopperAlgaeEnvironmental scienceBiologyOceanographyEcologyAnimal scienceBotanyChemistryGeology

Abstract

fetched live from OpenAlex

Enhanced vertical stratification brought about by warming of the ocean surface is expected to reduce vertical circulation and nutrient input with knock-on effects for phytoplankton. Increased nutrient limitation is one predicted outcome, but how that will impact phytoplankton is uncertain because we do not know how they will adapt. We used copper (Cu) as a model catalytic nutrient to explore the adaptive response of an oceanic diatom to continuous nutrient deprivation in laboratory experiments. Populations of Thalassiosira oceanica maintained under Cu-limiting and sufficient conditions for ~380 generations differed significantly in their abilities to grow in medium containing 1 nM Cu. Continued selection for more than 2000 generations increased Cu use efficiency (CuUE) of a low Cu-adapted (LCuA) population by more than 2-fold compared to the control and ancestral populations. The increase in CuUE resulted from a decrease in the amount of cellular Cu required for growth and an increase in the net carbon assimilation rate. Redistribution of cellular Cu and increased efficiency of photosynthetic reactions are hypothesized to explain the fast rates of maximum electron transport of low Cu-adapted cells despite containing less Cu. The results show that adaptation increased resource use efficiency in phytoplankton, which could reduce the impact of increased nutrient deficiency in the future ocean.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.209
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes2
Has abstractyes

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