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Abstract A025: Profiling tumor infiltrating immune cells for better understanding tumor status and better response to therapeutic strategy in soft tissue sarcomas

2022· article· en· W4296130292 on OpenAlexaboutno aff
Eun‐Young Lee, Hyun Guy Kang, June Hyuk Kim, Jong Woong Park, Seog Yun Park, Tak Yun, Hye Jin You

Bibliographic record

VenueClinical Cancer Research · 2022
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune cells in cancer
Canadian institutionsnot available
Fundersnot available
KeywordsImmune systemTumor microenvironmentCytotoxic T cellCD8ImmunotherapyPopulationSoft tissue sarcomaCancer researchBiologyImmunologyPathologySarcomaMedicine

Abstract

fetched live from OpenAlex

Abstract The tumor microenvironment is closely associated with tumor development and progression, which is made up of tumor cells, blood vessels, immune cells, fibroblast, and so on. Especially, immune cells within tumor microenvironments have been attracted in clinicians and researchers for unexpected therapeutic responses. Even in sarcoma, which is rare, and heterogenous leading to few options for cure, immune therapy has been tried and shown to be promising. However, the information of immune cells within soft tissue sarcomas were limited, which mostly have been obtained and characterized by omics-based analyses or tissue staining such as immunohistochemistry. Here, we established platform to profile tumor infiltrating immune cells by flow cytometry. About thirty sarcoma tissues were obtained, in which tumor infiltrating immune cells were profiled. The profiled data were confirmed by immunohistochemistry for correlation. It was shown that infiltrated leukocytes and CD3+ T cells were remarkably increased, whereas NKT and CD4+ T cells were decreased in tumor tissues compared to adjacent normal tissues. M1 macrophage was also increased in tumor tissues. High CD3+ T cell population was positively correlated with CD8+ T cells and PD1+ CD8+ T cell population. Especially, PD1+CD8+ T cells are usually expressed exhaustion-related conditions and low levels of cytotoxic immune cells. This study provides resources to understand immune cell population of soft tissue sarcoma, and will gain a fundamental matrix to study immunotherapy. These studies might show the possibility to find potential prognostic and immunotherapeutic targets. Citation Format: Eun-Young Lee, Hyun Guy Kang, June Hyuk Kim, Jong Woong Park, Seog Yun Park, Tak Yun, Hye Jin You. Profiling tumor infiltrating immune cells for better understanding tumor status and better response to therapeutic strategy in soft tissue sarcomas [abstract]. In: Proceedings of the AACR Special Conference: Sarcomas; 2022 May 9-12; Montreal, QC, Canada. Philadelphia (PA): AACR; Clin Cancer Res 2022;28(18_Suppl):Abstract nr A025.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.190
GPT teacher head0.458
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2022
Admission routes1
Has abstractyes

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