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Record W4296130589 · doi:10.1101/2022.09.12.22279856

A Simulation Study of Sampling in Difficult Settings: Statistical Superiority of Little-Used method

2022· preprint· en· W4296130589 on OpenAlexafffund
Harry S. Shannon, Patrick D. Emond, Benjamin M. Bolker, Román Viveros‐Aguilera

Bibliographic record

VenuemedRxiv · 2022
Typepreprint
Languageen
FieldMedicine
TopicData-Driven Disease Surveillance
Canadian institutionsMcMaster University
FundersCanadian Institutes of Health Research
KeywordsSimple random sampleCluster samplingStatisticsSampling (signal processing)PopulationSample (material)CensusSampling designSample size determinationSystematic samplingStratified samplingComputer scienceDemographyMathematicsGeographyTelecommunications

Abstract

fetched live from OpenAlex

Abstract Background Taking a representative sample to determine prevalence of variables such as disease is difficult when little is known about the target population. Several methods have been proposed that apply cluster sampling techniques to Primary Sampling Units (PSUs). The PSUs are typically towns or census tracts. Some methods are based on random walks within towns, e.g., the original World Health Organization’s Extended Program on Immunization (‘EPI’) surveys and variants, including sampling from four quadrants of each town (‘Quad’). Several major international surveys take random samples from small areas (‘SA’) such as census tracts. Another method uses satellite images and Global Positioning Systems to randomly sample within PSUs from squares in a superimposed grid (‘Square’). We used computer simulations to compare these sampling methods and simple random sampling within towns (‘SRS’) in virtual populations. SRS was our standard, even though it is impractical in low-information settings. Methods We constructed 50 virtual populations with varying characteristics, each comprising about a million people spread over 300 towns. The risk of disease for each person varied within and between towns. We created a binary exposure variable and allocated disease statuses to individuals assuming four relative risks (RRs) from exposure. We added three populations with equal risk of disease for every person in the population. For each population, each of the sampling methods – EPI, Quad, SA, Square, and SRS - and each of three sample sizes per PSU (7, 15, and 30), we simulated 1000 samples. For each simulation we estimated the prevalence and RRs. We used the bias and variance of the estimates to calculate the Root Mean Squared Error (RMSE) of these estimates. We ranked the RMSEs of each method and computed the ratio of each method’s RMSE to that of SRS for each population. We computed the mean ranks and ratios across the 50 populations. Results Apart from SRS, Square had the lowest mean rank of RMSEs for all samples sizes when estimating prevalence. When estimating RR, Square had the lowest mean ranks for samples sizes of 15 and 30 per PSU; for n=7 per PSU, the Quad mean rank was the lowest. The results for the mean ratios of RMSEs showed the same pattern; Square had the lowest values for all sample sizes when estimating prevalence and the lowest values for the two larger sample sizes when estimating RRs. Notably, when estimating prevalence, the ratios increased with sample size per PSU for SA, Quad, and EPI, suggesting those methods did not benefit as much from the larger sample sizes as would be expected from statistical theory. Conclusions Of several methods that are practical in an imperfectly known population, the Square method was mostly the best, especially for the larger sample sizes. The methods that sample within small areas (Quad, SA, and EPI) do not gain as much statistical benefit as expected from larger sample sizes per PSU, because of some clustering within the areas.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.089
metaresearch head score (Gemma)0.315
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.911
Threshold uncertainty score0.469

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0890.315
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0020.002
Science and technology studies0.0010.003
Scholarly communication0.0020.003
Open science0.0040.002
Research integrity0.0020.004
Insufficient payload (model declined to judge)0.0050.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.057
GPT teacher head0.405
Teacher spread0.349 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designSimulation or modeling
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes2
Has abstractyes

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