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Record W4296760522 · doi:10.21203/rs.3.rs-1770054/v1

Non-Small-Cell Lung Cancer Promotion by Air Pollutants

2022· preprint· en· W4296760522 on OpenAlexaff
Charles Swanton, William Hill, Emilia L. Lim, Claudia Lee, Clare E. Weeden, Marcellus Augustine, Kezhong Chen, Feng‐Che Kuan, Fabio Marongiu, Edward J. Evans, D. J. Moore, Felipe Silva Rodrigues, Febe van Maldegem, Jesse Boumelha, Selvaraju Veeriah, Andrew Rowan, Cristina Naceur‐Lombardelli, Takahiro Karasaki, Monica Sivakumar, Deborah R. Caswell, A. Nagano, Min Hyung Ryu, Ryan D. Huff, Shijia Li, Alastair Magness, Alejandro Suárez‐Bonnet, Simon L. Priestnall, Margreet Lüchtenborg, Katrina Lavelle, Joanna Pethick, Steven J. Hardy, Fiona E. McRonald, Meng‐Hung Lin, Clara I. Troccoli, Moumita Ghosh, York E. Miller, Daniel T. Merrick, Robert L. Keith, Maise Al Bakir, Chris Bailey, Lao H. Saal, Yilun Chen, Anthony M. George, Chris Abbosh, Nnennaya Kanu, Se‐Hoon Lee, Nicholas McGranahan, Chistine Berg, Eva Grönroos, Julian Downward, Tyler Jacks, Christopher Carlsten, Ilaria Malanchi, Allan Hackshaw, Kevin Litchfield, Mariam Jamal‐Hanjani, James DeGregori

Bibliographic record

VenueResearch Square · 2022
Typepreprint
Languageen
FieldEnvironmental Science
TopicAir Quality and Health Impacts
Canadian institutionsVancouver Coastal Health Research InstituteVancouver Coastal Health
FundersNational Cancer InstituteNational Human Genome Research InstituteJapan Society for the Promotion of ScienceLUNGevity FoundationEntertainment Industry FoundationMinistry of Science and ICT, South KoreaStand Up To CancerNational Research Foundation of KoreaMedical Research CouncilPeking University People's HospitalNational Natural Science Foundation of ChinaRoyal SocietyKorea Health Industry Development InstituteChang Gung Medical FoundationNational Institute for Health and Care ResearchPeking UniversityWellcome TrustUniversity College LondonCancer Research UKAmerican Association for Cancer ResearchNational Research FoundationChinese Academy of Medical SciencesFrancis Crick InstituteRosetrees TrustEuropean CommissionBreast Cancer Research Foundation
KeywordsPollutantPromotion (chess)Lung cancerAir pollutantsEnvironmental scienceBusinessEnvironmental healthMedicineOncologyPolitical scienceAir pollutionBiologyEcology

Abstract

fetched live from OpenAlex

Abstract Environmental carcinogenic exposures are major contributors to global disease burden yet how they promote cancer is unclear. Over 70 years ago, the concept of tumour promoting agents driving latent clones to expand was first proposed. In support of this model, recent evidence suggests that human tissue contains a patchwork of mutant clones, some of which harbour oncogenic mutations, and many environmental carcinogens lack a clear mutational signature. We hypothesised that the environmental carcinogen, <2.5μm particulate matter (PM2.5), might promote lung cancer promotion through non-mutagenic mechanisms by acting on pre-existing mutant clones within normal tissues in patients with lung cancer who have never smoked, a disease with a high frequency of EGFR activating mutations. We analysed PM2.5 levels and cancer incidence reported by UK Biobank, Public Health England, Taiwan Chang Gung Memorial Hospital (CGMH) and Korean Samsung Medical Centre (SMC) from a total of 463,679 individuals between 2006-2018. We report associations between PM2.5 levels and the incidence of several cancers, including EGFR mutant lung cancer. We find that pollution on a background of EGFR mutant lung epithelium promotes a progenitor-like cell state and demonstrate that PM accelerates lung cancer progression in EGFR and Kras mutant mouse lung cancer models. Through parallel exposure studies in mouse and human participants, we find evidence that inflammatory mediators, such as interleukin-1ꞵ, may act upon EGFR mutant clones to drive expansion of progenitor cells. Ultradeep mutational profiling of histologically normal lung tissue from 247 individuals across 3 clinical cohorts revealed oncogenic EGFR and KRAS driver mutations in 18% and 33% of normal tissue samples, respectively. These results support a tumour-promoting role for PM acting on latent mutant clones in normal lung tissue and add to evidence providing an urgent mandate to address air pollution in urban areas.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.095
GPT teacher head0.431
Teacher spread0.336 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2022
Admission routes1
Has abstractyes

Explore more

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