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Record W4297324028 · doi:10.1101/2022.09.25.509397

Quantifying Spatio-Temporal Overlap of Invasive Wild Pigs and Domestic Pig Farms as a Proxy for Potential Disease Transmission Risk

2022· preprint· en· W4297324028 on OpenAlexaffabout
Ruth A. Aschim, Ryan K. Brook

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2022
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicAnimal Disease Management and Epidemiology
Canadian institutionsUniversity of Saskatchewan
Fundersnot available
KeywordsWild boarDomestic pigWildlifeLivestockChronic wasting diseasePig farmingGeographyDomesticationWildlife diseaseVeterinary medicineTransmission (telecommunications)BiologySpatial epidemiologyEcologyAnimal scienceDiseaseForestryAnimal productionMedicineEpidemiology

Abstract

fetched live from OpenAlex

Abstract Direct and indirect interactions between livestock and free-ranging wildlife creates important risks to animal health and agricultural productivity. The interface between newly established and rapidly spreading invasive wild pigs and the 2,549 domestic pig farms on the Prairie Provinces of western Canada has created important but poorly understood disease transmission risks. We mapped the spatial overlap of wild and domestic pigs to identify the areas of highest risk and associated distribution of diseases of concern using databases of wild pig occurrences and domestic pig farm locations. We also examined spatial and temporal overlap at the individual farm scale using GPS collared invasive wild pigs. Across the provinces of Alberta, Saskatchewan, and Manitoba, spatial overlap of invasive wild pigs with all combined, large-scale domestic pig farms, small-scale domestic pig farms, and domestic wild boar farms was 21%, 21%, 21%, and 53%. Invasive wild pig locations were significantly closer to domestic pig farms and domestic wild boar farms compared to random points on the landscape. The number of wild pig occurrences was greatest within 20 km of domestic pig farms and decreased linearly as distance increased. The Canadian distribution of wild pigs had considerable spatial overlap with recent areas detected with bovine tuberculosis (6,002 km 2 ) in livestock and wildlife and Chronic Wasting Disease (156,159 km 2 ) in wildlife, including mule deer, white-tailed deer, elk, and moose. The single best predictor of invasive wild pig occurrences across the landscape was close proximity to current or recently past existing domestic wild boar farms. The distance of GPS- collared wild pigs was significant for sex, farm type, month, and season and in southeastern Saskatchewan, average distance to domestic pig farms was 5.3 km. The weighted sum of cover type proportions, wild pig distance to domestic pig and wild boar farms, farm type, and farm density identified the relative risk of wild pig presence associated to each domestic pig farm occupied watershed. Risk was highest for small-scale domestic pig farms and lowest for large- scale domestic pig farms. Our findings highlight important potential routes for disease transmission at the invasive wild pig-domestic pig interface and identify areas where biosecurity improvements are urgently needed. While complete eradication of invasive wild pigs in Canada is no longer achievable, improved passive and active monitoring and removal of wild pigs is critical, especially where risks to domestic pig herds is highest.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.273
Threshold uncertainty score0.543

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.003
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.247
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes2
Has abstractyes

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