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Development of a Knowledge-sharing Website for Hypersensitivity Pneumonitis Exposures

2022· article· en· W4298149529 on OpenAlexaff
Hayley Barnes, Jesse Lu, Kerri A. Johannson

Bibliographic record

VenueATS Scholar · 2022
Typearticle
Languageen
FieldMedicine
TopicInterstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
Canadian institutionsUniversity of CalgaryUniversity of Toronto
FundersNational Health and Medical Research Council
KeywordsHypersensitivity pneumonitisMEDLINEWeb of scienceMedicineWorld Wide WebComputer sciencePathologyMeta-analysisInternal medicinePolitical science

Abstract

fetched live from OpenAlex

Background: Identification of potential inciting antigens known to be associated with hypersensitivity pneumonitis (HP) is integral to achieving a confident diagnosis, its management, and prognostication. A barrier to achieving diagnostic confidence is that evidence for exposure assessment is not presented in an easily accessible or useful format. Objective: To develop a freely available comprehensive living repository of contemporaneous exposures associated with HP. Methods: . Articles were included if they described adults or children with a diagnosis of HP (as defined by authors) and a description of the causative exposure. Website development used a structured query language database and was powered by WordPress. Results: HPLung.com is a freely available online searchable repository that lists all exposures and antigens associated with HP and links to their parent studies. Eighty-five unique exposures from 447 citations have been included thus far. The website continues to be updated iteratively. Since its launch in 2019, HPLung.com has been visited over 4,500 times by users from 75 different countries. Conclusion: HPLung.com is a novel knowledge-sharing tool that addresses barriers of accessibility, contemporaneity, efficient evidence synthesis, and making the best use of technological platforms to improve the exposure assessment of those suspected of HP.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.808
Threshold uncertainty score0.472

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.291
Teacher spread0.259 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2022
Admission routes1
Has abstractyes

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