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Record W4301846822 · doi:10.26443/msurj.v9i1.158

High UV Excitation Intensity Induces Photoconversion of DAPI During Wide-Field Microscopy

2014· article· en· W4301846822 on OpenAlexaff
Stefan Rodic, Claire M. Brown, Erika Wee

Bibliographic record

VenueMcGill Science Undergraduate Research Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
Topicbioluminescence and chemiluminescence research
Canadian institutionsMcGill University
Fundersnot available
KeywordsDAPIFluorescenceMicroscopyFluorescence microscopeAnalytical Chemistry (journal)Materials scienceChemistryPhotochemistryOpticsChromatographyPhysics

Abstract

fetched live from OpenAlex

Background: Multi-color fluorescence microscopy is dependent on the spectral specificity of the dyes and probes used for localization. One of the most commonly used fluorescent DNA dyes is DAPI, which is usually excited by UV light to emit in the blue visible light range. Herein, we describe a pattern of decreasing DAPI fluorescence upon extended UV exposure, closely followed by an increase in emission maxima in the green range.
 Methods: UV-induced photo-conversion of DAPI to green-fluorescing photoproducts was studied on Chinese hamster ovary cells using wide-field fluorescence microscopy, at different UV exposure times and intensities. Imaging was done in repetitive cycles, by alternating between a DAPI and FITC filter cube and following this with a 1 second UV excitation time. The effect of differing UV light intensities on the photo- conversion process was not previously described in the literature.
 Results: Upon image analysis from a large sample of cells, the rate of photo-conversion was shown to be dependent on both the duration of UV excitation and the intensity of the UV light source. Both the process of DAPI depletion and photo-product growth showed biphasic exponential patterns of change. Furthermore, the level of DAPI fluorescence intensity was found to be negatively correlated with the green fluorescence of the photo-product.
 Limitations: This study did not examine the effect of differing mounting media or a variation in DAPI concentration on the rate of DAPI photo-conversion. Also, the exact light dosage to the system was not measured from the 100W Hg bulb. Photo-bleaching of green fluorescence in cells not stained with DAPI was not measured to control for bleaching of endogenous cell molecules.
 Conclusion: Based on our findings, a set of recommendations was formulated in order to help reduce the effects of UV-induced DAPI photo-conversion.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.987

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0040.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.341
Teacher spread0.313 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2014
Admission routes1
Has abstractyes

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