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Record W4307448402 · doi:10.1101/2022.10.17.512636

Patterns of community science data use in peer-reviewed research on biodiversity

2022· preprint· en· W4307448402 on OpenAlexaff
Allison D. Binley, Jaimie G. Vincent, Trina Rytwinski, Caitlyn A. Proctor, E.S. Urness, Sierra A. Davis, Peter Soroye, Joseph Bennett

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2022
Typepreprint
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsWilfrid Laurier UniversityUniversity of OttawaCarleton University
Fundersnot available
KeywordsBiodiversityCitizen scienceThreatened speciesRange (aeronautics)GeographyData scienceEcologyComputer scienceBiologyHabitat

Abstract

fetched live from OpenAlex

Abstract Community science (“citizen science”) represent a potentially abundant and inexpensive source of information for biodiversity research. However, analyzing such data has inherent challenges. To explore where and how community science data are translated into scientific knowledge, we conducted a literature review in a sample of 334 peer-reviewed scientific articles. Specifically, we investigated how the use of community science data varied among taxonomic groups and geographic regions, and what threats to biodiversity, if any, were examined. Community science data were used mostly for research on birds and invertebrates, and the data used were mainly from the United States and the United Kingdom. Literature in certain countries used a wider breadth of projects, while others made repeated use of comparably fewer datasets. Community science efforts were largely used to measure abundance, trends, distributions, and range shifts. However, few articles linked these metrics to any particular threats to biodiversity. Furthermore, community science data were used infrequently for research on threatened species and limited mostly to count data rather than collecting more specific information such as life history, phenological or genetic data, suggesting that community science may be underutilized for these key aspects of biodiversity conservation. We conclude that even with the rise of community science data use in research, there remains tremendous potential to better use these existing datasets for biodiversity research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.169
metaresearch head score (Gemma)0.523
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.831
Threshold uncertainty score0.894

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1690.523
Meta-epidemiology (narrow)0.0000.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0720.071
Science and technology studies0.0020.004
Scholarly communication0.0110.010
Open science0.0030.007
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.226
GPT teacher head0.343
Teacher spread0.117 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designObservational
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes1
Has abstractyes

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Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicSpecies Distribution and Climate Change→French-language works237,207→