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Record W4308977216 · doi:10.1093/neuonc/noac209.808

EXTH-09. HSP90 INHIBITION AS A NOVEL THERAPY FOR DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG)

2022· article· en· W4308977216 on OpenAlexaff
Stefanie-Grace Sbergio, Javal Sheth, Laura Canty, Sanja Pajovic, Arun Anguraj Vadivel, Sheyenne Carette, Robert Siddaway, Cynthia Hawkins

Bibliographic record

VenueNeuro-Oncology · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHeat shock proteins research
Canadian institutionsSickKids FoundationHospital for Sick ChildrenUniversity of Toronto
Fundersnot available
KeywordsHsp90Hsp90 inhibitorCancer researchGliomaMedicineCancerCell cultureViability assayBiologyHeat shock proteinInternal medicineBiochemistryGeneticsGene

Abstract

fetched live from OpenAlex

Abstract Diffuse intrinsic pontine glioma (DIPG) is an aggressive pediatric brain tumor. The mean age of onset is 7-9 years with a median survival of 9 months following diagnosis. Histone 3 (H3) mutations (H3K27M) have been identified in approximately 80% of patients, representing an intriguing target, but how to do this is unclear. To address this, we performed a synthetic lethality drug screen of over 2400 compounds on isogenic cells expressing H3K27M and empty vector. 37 drugs were synthetically lethal with H3K27M, including HSP90 inhibitors. In cancer, HSP90 has a higher isoelectric point which can be targeted specifically by PU-H71. Using PU-H71, HSP90 complexed with oncogenic clients can be inhibited to reduce tumor cell viability. We tested PU-H71 on primary patient derived DIPG lines demonstrating caspase-3/7 mediated cell death within 24 hours (n=3) and an IC50 of 100-200 nM (n=5) at 72 hours. HSP90 is a molecular chaperone that supports protein activation and localization; thus, its inhibition may allow simultaneous targeting of multiple oncogenic pathways. To determine which pathways are targeted in DIPG we used PU-H71-conjugated beads to pull-down HSP90 complexed with client proteins. LC-MS/MS characterization of the HSP90 interactome from three DIPG cell lines (SU-DIPG XVII, SU-DIPGXXV, SU-DIPG 50) identified 339 overlapping proteins including MAPK3, SMS, SRM, CTSP1, OAT, GMPS, and PYG. Pathway enrichment analysis highlighted roles in cell cycle regulation and metabolic processes. Treating DIPG with PU-H71 successfully reduced tumor cell viability but PU-H71 has poor brain penetration. To overcome this, a molecular isoform of PU-H71 has been developed, PU-HZ151, which will be used to test the in vivo efficacy of HSP90 inhibition for DIPG.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.318
Teacher spread0.294 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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