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Record W4309952127 · doi:10.1099/acmi.0.000525.v1

Yersinia pseudotuberculosis Bacteremia with Splenic Abscesses: A Case Report

2022· preprint· en· W4309952127 on OpenAlexaffabout
Rahel T Zewude, Zersenay Alem, Aleksandra Stefanovic

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYersinia bacterium, plague, ectoparasites research
Canadian institutionsUniversity of British ColumbiaProvidence Health CareUniversity of Toronto
Fundersnot available
KeywordsYersinia pseudotuberculosisBacteremiaMesenteric lymph nodesYersinia enterocoliticaMedicineCirrhosisYersiniaOutbreakSpleenMicrobiologyAntibioticsInternal medicinePathologyBiologyBacteria

Abstract

fetched live from OpenAlex

Yersinia pseudotuberculosis is a gram-negative bacillus from the family of Yersiniacae. Similar to the other member of the family, Yersinia enterocolitica, Y. pseudotuberculosis most commonly presents with enteric illness [1]. The sources of infection with Y. pseudotuberculosis include contaminated food such as dairy and vegetables or contaminated water [2]. Direct contact with animals including dogs, rodents, rabbits, farm animals or birds has also been described as other modes of acquisition [1,2]. Community outbreaks secondary to contaminated lettuce, carrots, and water have been reported in Finland, Japan, Russia and Canada [3,4]. Although it often presents as mild gastroenteritis, several other clinical manifestations have been reported with Y. pseudotuberculosis [1]. Pseudoappendicitis with mesenteric lymphadenitis is a well described phenomenon and many patients in the 20th century underwent appendectomies due to erroneous diagnosis after presenting with right lower quadrant abdominal pain [5]. Bacteremia is rare and when it occurs it has been associated with abscesses in spleen, liver, kidneys, lung with granulomatous appearance that mimics tuberculosis [5,6]. Although it is commonly a self-limiting illness in immunocompetent patients without liver disease, septicemia with Y. pseudotuberculosis is thought to carry a fatality rate that exceeds 75% without antibiotics [2]. Here we present a case of Yersinia pseudotuberculosis bacteremia with splenic abscesses in a patient with previously undiagnosed liver cirrhosis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0040.003
Meta-epidemiology (broad)0.0030.002
Bibliometrics0.0060.005
Science and technology studies0.0050.004
Scholarly communication0.0040.005
Open science0.0020.005
Research integrity0.0100.007
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.301
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes2
Has abstractyes

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